Gordonia bronchialis: Gbro_0427
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Entry
Gbro_0427 CDS
T01102
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gbr
Gordonia bronchialis
Pathway
gbr03030
DNA replication
gbr03430
Mismatch repair
gbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gbro_0427
03430 Mismatch repair
Gbro_0427
03440 Homologous recombination
Gbro_0427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbr03032
]
Gbro_0427
03400 DNA repair and recombination proteins [BR:
gbr03400
]
Gbro_0427
Enzymes [BR:
gbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gbro_0427
DNA replication proteins [BR:
gbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gbro_0427
DNA repair and recombination proteins [BR:
gbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gbro_0427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
DNAX_ATPase_lid
RuvB_N
AAA_16
AAA_30
AAA_19
AAA_5
AAA_14
Rad17
Mg_chelatase
AAA_18
AAA_28
nSTAND3
DnaX_C
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ACY19761
UniProt:
D0LDE1
LinkDB
All DBs
Position
476696..479020
Genome browser
AA seq
774 aa
AA seq
DB search
MALYRTYRPATFADVVGQEHVTDPLSHALDAGRINHAYLFSGPRGCGKTSSARILARSLN
CVQGPTSTPCGECVSCVALAPGGPGNLDVIELDAASHGGVDDTRELRDRAFYAPAESRYR
VFIVDEAHMVTNAGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPP
VMRGLLERICAQEHVTVAPEVYPLVIRAGGGSPRDSLSILDQLLAGADDRGVTYDRALAL
LGVTDIALIDDTIDALATGDGATLFGTVEKVVDAGHDPRRFAVDLLERLRDLILLQAVPD
AAERGLVEAPGDQLARMNRQIETLGAASLTRFAELVHAALGEMRGTTSPRLLLEVMCARM
LLPAVSADEIAVLQRLERLESGVRASVPIPAAPSEPEPEPKFVRPSQRKAMEEAKASAVA
ERTEAEEAEADDVQGIEPGAVGVDGEPVRGGGTPTAPQPPARTPAARVEPEPEPQPAPVP
EPEPREPEPVASREPEPEPEAEPVVSQEPETQHVASRDPEPQPGAPREPEPRSVAEPAPE
TESIVAEDIPLPDEPFDEYDAPPDEPSSPRRAPDPEPEPEAAPTVPGLDADTLRKRFQEV
RAAVRAQSPQGKTVEPMLSPATVHDLDGDVVVLSHPTELLVGRLSAPHNVAIIRAALQEV
FGTPLDVRTIHVPPGAAAPAGAPRQSRTAQQSKPRQTFSRPSRARDQGAPSAPAPEPVAE
PEEPEPPRADEDIPDEERKEMVADAQAASPEGRHDPDKVALELLKTELGARPLE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgtatcgcacctatcgcccggctacgttcgccgacgtcgtcggccaggagcat
gtcacagacccgctgagccatgcgctcgatgccggccgaatcaatcatgcgtacctgttc
tccgggccgcgcggttgcggcaagacgtcgtcggcgcgcatcctcgcgcggtccctcaac
tgtgtgcagggaccgacgtcgacgccgtgcggggaatgcgtctcgtgcgtcgcgctcgcc
ccgggcgggccgggcaacctcgacgtcatcgagctcgacgcggccagccacggtggcgtc
gacgacacgcgtgagctgcgggaccgggcgttctatgcgccggccgagtcgcgctaccgc
gtgttcatcgtcgacgaggcacacatggtcaccaacgcgggcttcaacgcgctgctcaag
atcgtggaggagccgccggagcatctgatcttcgtcttcgccaccaccgagccagagaag
gtgttgcccaccatccgctcgcgcacccaccactacccgttccggctgctcgcgccgccg
gtgatgcgcggacttttggagaggatctgcgcccaggagcacgtgaccgtggcacccgag
gtctatccgctggtgatccgcgccggtggggggtcgccgcgcgactcgctctcgattctc
gatcagttgctcgccggcgccgatgaccggggcgtcacctacgaccgggctctcgcgcta
ctcggcgtcaccgacatcgcgctcatcgacgacaccatcgacgctcttgccactggcgac
ggcgcaaccctgttcggcaccgtcgagaaggtcgtcgacgccgggcacgatccgcgtcgc
tttgccgtcgaccttctcgaacggttgcgggatctcattctgctgcaagctgttccggat
gcggccgagcgtggcctggtggaagcaccaggcgatcagctggcccggatgaacaggcag
atcgagaccctgggtgcggcgtcgctcacccgtttcgccgaactcgtccacgccgcgctg
ggggagatgcgcggtaccacatcgccgcgactgctgctcgaggtgatgtgtgcgcggatg
ttgctgccggcggtgtcggccgacgagatcgcggtgctgcagcggctggaacgactcgaa
tccggtgtgcgggcgtcggtgccgatcccggccgcgccgagtgaacccgaacccgaaccc
aagttcgtgcgtccgtcgcagcgcaaggcgatggaggaggccaaggcgtcggcggttgcc
gaacgtaccgaagccgaggaagccgaggccgacgacgtgcagggcatcgaacctggtgct
gtcggcgtggacggggagccggtgcgtgggggtggcacgcccactgctccgcaaccgccg
gctcggacacctgctgcgcgggtcgagccggaaccggaaccgcagcccgcccccgtacct
gagccggagccgcgtgagccggaaccggttgcctcgcgtgaacccgagccggagcccgag
gcggagccggtcgtctcgcaggaacccgagacgcagcacgtcgcgtcacgggatcccgag
ccgcaacctggtgcccctcgtgagcccgagccgcggagcgtggccgagcctgctccggag
acggaaagcattgtcgccgaggatattccattgccggacgagccgttcgacgagtacgac
gctccgccggacgagccgtcgtcgccgcggcgtgcgccggacccggaacccgaaccggag
gcggcgcccacggtgcccggactcgatgccgacacactgcgcaagcgttttcaggaggtt
cgtgccgcagtgcgggcgcagagtccgcagggcaagacggtggaaccgatgctgtcgccg
gccaccgtgcacgacctcgacggcgacgtcgtggtgctctcccatcccaccgaactcctg
gtgggcaggctgtccgcgccgcacaacgtcgccatcatccgggctgcgctccaggaggtg
ttcggtacgccactcgacgtgcggacgatccatgtgccgcccggcgcggccgcaccggcc
ggggcgccgcgacagtcccggacggcacagcaatccaaaccgcgacagaccttttcgcgg
cccagtcgggcgcgcgaccagggcgcaccgtcggctccggcacccgagccggtggccgaa
cccgaggagcccgaaccgcctcgcgcggacgaggacatccccgacgaggagcgcaaggag
atggtcgccgacgcgcaggcggcctccccggagggacgtcacgatccggacaaggtcgcg
ctggaactgctcaagaccgagttgggggcgcgtccgctcgagtga
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