Gordonia bronchialis: Gbro_0440
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Entry
Gbro_0440 CDS
T01102
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gbr
Gordonia bronchialis
Pathway
gbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Gbro_0440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbr03400
]
Gbro_0440
Enzymes [BR:
gbr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Gbro_0440
DNA repair and recombination proteins [BR:
gbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Gbro_0440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
TAF1C_HB
Motif
Other DBs
NCBI-ProteinID:
ACY19774
UniProt:
D0LDF4
LinkDB
All DBs
Position
488961..489716
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AA seq
251 aa
AA seq
DB search
MSHYPGIVRGYRSIAALDRDLVGCRACPRLVAWREQVGREKRRAFADQEYWARPVPGFGP
SDAAVVIIGLAPAAHGGNRTGRMFTGDQSGDVLFAALHAAGLANQATSVSADDGLLLYGT
RVTAPVHCAPPQNKPTPQERDECAHWLHSELELLAPTMRSVVALGAFGWRQTLHTFGTLG
WSVPRPRPAFGHGAHTVLTRGDRSIGVFGCYHVSQHNTFTGRLTPTMVVDVLSAAARYAD
LGYAVRSEDSE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgagccactaccctgggatcgtgcgtggataccggagcatcgccgcactcgaccgggac
ctggtcgggtgccgggcgtgtccgcgtctggttgcgtggcgtgagcaggtggggcgggag
aagcggcgtgctttcgccgaccaggagtactgggcccgcccggtcccggggttcgggccg
tcggacgctgcggtcgtcatcatcggcctggcgccggcagcgcacggcgggaatcggacg
ggccgcatgttcaccggcgaccagagcggcgacgtgctgttcgccgcactgcacgccgcg
ggactcgccaatcaggcgacctcggtatcggccgatgacgggctgctcctctacggcacg
cgcgtgaccgccccggtgcattgcgcgcctccacagaacaagccgacgccgcaggagcgc
gacgagtgcgcgcactggctgcacagcgaactggaactgcttgcgccgacgatgcggtcg
gtggtggcgctcggcgccttcgggtggcggcagacgctgcacacgttcggcacactgggt
tggtcggtgccacgtccgcggccggcgttcggtcacggcgcgcacaccgtgctgacccgc
ggagatcgctcgatcggtgttttcggctgctatcacgtgagccagcacaacaccttcacc
ggccgtctcacgccgacgatggtggtcgacgtactgagcgcggccgcccggtacgccgac
ctcgggtacgccgtccgatcagaggattccgagtga
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