Gordonia bronchialis: Gbro_0575
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Entry
Gbro_0575 CDS
T01102
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gbr
Gordonia bronchialis
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbr03032
]
Gbro_0575
03400 DNA repair and recombination proteins [BR:
gbr03400
]
Gbro_0575
Enzymes [BR:
gbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Gbro_0575
DNA replication proteins [BR:
gbr03032
]
Prokaryotic type
DNA Topoisomerases
Gbro_0575
DNA repair and recombination proteins [BR:
gbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Gbro_0575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
ACY19904
UniProt:
D0LEI6
LinkDB
All DBs
Position
610125..613220
Genome browser
AA seq
1031 aa
AA seq
DB search
MADTSTATPTNGRTLRRLVIVESPTKARKIAGYLGSNYVVESSRGHIRDLPRGAADVPAK
YKGQPWARLGVNVDENFEPLYVVSPDKKSTVTELKSLMRDVDELYLATDGDREGEAIAWH
LLETLKPKIPVKRMVFHEITEPAIRAAAENPRDLDIDLVDAQETRRILDRLYGYEVSPVL
WKKVMPKLSAGRVQSVATRIIVERERERMAFVSAEYWDIDANMDAGKDASPQTFNARLVG
VDDARVATGRDFDSRGALKRADGVVVLDETRARALADALDGADITVSSVEEKPYTRRPYA
PFMTSTLQQEAGRKLRFSSDRTMRIAQRLYENGFITYMRTDSTTLSESAINAARAQAREL
YGDNYVHPTPRQHTRKVKNAQEAHEAIRPAGESFRTPGQVAGQLEADEFRLYELIWQRTV
ASQMADAKGTTLSLRMTGTASTGETCVFAASGRTITFPGFLSAYVETVDDLAGGQADDAE
NRLPQLREGQALRATELSADGHSTNPPARFTEASLVKVLEELGIGRPSTYASIIGTIQDR
GYVVKKGNALVPSWIAFAVVGLLEAYFQGLVDYDFTASLEDDLDEIASGRENRTRWLTEF
YFGDAAPNAEHDAEIAGSEIAKHGGLKKLVGVNLEEIDAREVNSIRLFDDEQGRPVYVRV
GRFGPYLERNLSAASAASPDAEPDLQRANLPADITPDELTLALAEKLFSTPQEGRSLGVD
PVTGHEIVAKEGRFGPYVTEILPSDDDDDDGNSPATVPAGPTPRDGGGTGGQGSDAEVVP
LDTPSGGGTATKTAAKAAAKKTTAKKAAKKAGPKPRTGSLFKTMDISTVTLDDALKLLSL
PRVVGVDPESGDEITAQNGRYGPYLKKGTDSRSLTSEEQLFSITLDEALKIYSEPKRRGR
QAAAPPLRDLGKEDSVSGKPMVIKDGRFGPYVTDGETNASLRKGDEVATITPERAMELLA
DRRARGPATKRAKKAPAKKATAAKKTAAKKTAAKKTAAKKTTAKKTTAKKTTAKKTAAKK
TTAKKTTDTGE
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
gtggccgataccagcaccgcaacccccacgaatgggcgcacgctccgacgactcgtgatc
gtcgagtccccgaccaaggcccgcaagatcgccggctacctcgggtcgaactacgtcgtg
gagtcgtctcgcggacacatccgtgacctgccgcgcggcgccgccgatgtgccggccaag
tacaagggccagccgtgggcgcgtctcggcgtgaacgtcgacgagaacttcgagccgctc
tatgtggtctcgccggacaagaagtccacggtcaccgagctgaagtcgctgatgcgggac
gtcgacgagctctacctcgccaccgacggtgaccgcgagggtgaggcgatcgcctggcat
ctgcttgagacgctcaagcccaagatcccggtcaagcggatggtgttccacgagatcacc
gaacccgccatccgcgccgccgccgagaacccccgcgacctcgacatcgacctcgtcgac
gcccaggagacccgccgcatcctcgaccgcctatacggctacgaggtgtcgccggtgctg
tggaagaaggtcatgccgaagctgtcggcgggccgcgtgcagtcggtggccacccgcatc
atcgtcgagcgcgaacgtgagcggatggcgttcgtgtccgccgagtactgggacatcgac
gccaacatggatgcgggcaaggacgccagcccgcagaccttcaacgcgcggttggtgggc
gtcgacgacgcccgggtcgcgaccggacgcgacttcgactcgcggggtgcgctcaagcgt
gccgacggtgtggtggtgctcgacgagacacgtgcccgggcactggccgacgccctcgac
ggcgccgacatcaccgtcagctcggtggaggagaagccctacacccgtcgcccgtacgcg
ccgttcatgacctcgacgctgcagcaggaggccggccgcaagctgcggttctcctccgac
cgcactatgcgcatcgcgcagcgcctgtacgagaacggtttcatcacctacatgcgtacc
gactcgacgacgctgagcgagtcggcgatcaacgcggcacgcgcgcaggcacgagagctg
tacggcgacaactacgttcacccgaccccgcgccagcacacccgcaaggtgaagaacgcg
caggaggcacacgaggcgatccgcccggccggcgagtcgttccggacgcccggtcaggtg
gcggggcagctcgaagccgacgagttccgtctctacgagctgatctggcagcgcaccgtc
gcctcccagatggctgacgccaagggcaccaccctgagcctgcggatgaccggcaccgcg
tccaccggcgagacctgtgtgttcgccgcgtcgggccgtaccatcaccttccccggcttc
ctgtcggcctacgtggagaccgtcgacgatctcgccggtggtcaggccgacgacgccgag
aaccgtctgccgcagctgcgcgaggggcaggcgctgcgggccaccgagctctcggccgac
gggcactccaccaacccgcccgcccggttcaccgaggcgtcgctggtcaaggtgctcgaa
gaactcggcatcggccggccgtcgacgtacgcgtcgatcatcgggaccatccaggaccgc
ggttacgtcgtcaagaagggcaacgccctggtgccgtcgtggatcgcgttcgcggtcgtc
gggctgctcgaggcgtacttccagggcctggtggactacgacttcaccgcatccctcgag
gacgacctcgacgagatcgccagcggccgcgagaaccggacacgctggctgaccgagttc
tacttcggcgacgcggcacccaacgcggagcacgacgctgaaatagccggttcggagatc
gccaagcacggtggcctgaagaagctcgtgggcgtcaatctcgaggagatcgacgcccgc
gaggtcaactccatccggctcttcgacgacgagcagggccggccggtgtacgtgcgtgtc
ggacggttcggcccgtacctggaacgcaatctgtctgccgcctcagcagcctcgccggac
gccgagccggatctgcagcgagccaacctgcccgccgacatcaccccggacgaactgacc
ctcgccctcgccgaaaagctgttctcgacgccgcaggagggacgctcgctgggcgtcgac
ccggtgaccgggcacgagatcgtcgccaaggagggccgcttcggtccgtacgtcaccgag
atcctgccgtcggacgacgacgatgacgatggcaacagccccgcaaccgtgccggccggt
ccgacgccgcgcgatggtggtggcacgggtggtcagggctccgacgccgaggtggtcccg
ctggacacgccgtcgggtggcggaacggccaccaagaccgcggccaaggctgccgccaag
aagaccaccgcgaagaaggcggccaagaaggcagggccgaagccgcggaccggttcgctg
ttcaagacgatggacatctccaccgtcaccctcgacgacgcactgaagttgctgtcgctg
ccccgcgtcgtcggcgtcgacccggagtcgggtgacgagatcaccgcacagaacggccgg
tacggtccgtatctgaagaaggggaccgactcgcggtcgctgaccagcgaggagcagctc
ttctcgatcaccctcgacgaggcgctgaagatctattccgagcccaaacgccgcggtcgt
caggccgctgcgccgccgctgcgcgacctgggcaaggaggattcggtgagcgggaagccg
atggtgatcaaggacggccgcttcggcccgtacgtcaccgacggcgagaccaacgccagc
ctgcgcaagggcgacgaggtggccaccatcacccctgagcgggcgatggagctgctcgcc
gatcgccgggcccgcggtccggccaccaagcgcgccaagaaggccccggccaagaaggcg
acggctgcgaagaagactgccgcgaagaagactgctgccaagaagaccgccgcgaagaag
acgacagcgaagaagacgacagcgaagaagacgacagcgaagaagaccgccgcgaagaag
accaccgcgaagaagaccaccgacaccggcgagtag
DBGET
integrated database retrieval system
