Gordonia bronchialis: Gbro_1339
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Entry
Gbro_1339 CDS
T01102
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbr
Gordonia bronchialis
Pathway
gbr03420
Nucleotide excision repair
gbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Gbro_1339
03430 Mismatch repair
Gbro_1339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbr03400
]
Gbro_1339
Enzymes [BR:
gbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gbro_1339
DNA repair and recombination proteins [BR:
gbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gbro_1339
MMR (mismatch excision repair)
Other MMR factors
Gbro_1339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACY20626
UniProt:
D0L669
LinkDB
All DBs
Position
1402887..1405373
Genome browser
AA seq
828 aa
AA seq
DB search
MTSSSVPSAVPSAGVPPTDPAITRLLDGLNPQQRAAVLHTGAPLLIVAGAGSGKTAVLTR
RIAYLLAARDVSPGQVLAITFTNKAAAEMRERVIDLVGPRATYMWVSTFHSTCVRILRAQ
SGLLAGMNSNFSIYDADDSKRLLGMIIRDLELDPKKFSPRGVGVAISNFKNELVGPEQAV
EAAASDEPAAQQIARIYAEYQRRLRAANAFDFDDLIGETVALLHAHPEVAEYYRRRFRHV
LVDEYQDTNHAQYVLIRELVGEVPTAGGLEPSELCVVGDADQSIYAFRGATIRNIEEFER
DFPNAETILLEQNYRSTQTILSAANAVIARNENRRDKRLWTDSGDGELIVGYVADSDRDE
STFIAKEIESLTDYSIGGSSSHKYSDIAVFYRTNTGSRALEEVFVRHGIPYKVVGGTKFY
ERKEVRDVVAYLRVVANPDDAVSLRRILNTPRRGIGDRAEACVAVHSENTGRSFYESLID
AAAGKVAMLNTRAIKQIGGFVDLIEGLRTDFLTAFGAAGESDEDVAFIDATEEGADIGEL
VDAIVERTGYRGELEASNDPQDGARLDNLNELISVAQEFSRDAAELAEDEAADDDDPLES
GRDTEGEPDPGSLAAFLERVSLVADADQLPDEGEGVVTMMTLHTAKGLEFPVVFVTGWED
GHFPHMRAMGDPAELSEERRLAYVGITRAKERLYLTRSITRASWGQPVSNPESRFLQEIP
QHLLDWRRTEPRRTQSRFGGSSGGIFGRDGATSSGLRGRSSYSSDPSRGRNTFVNYEVGD
RHNHPKYGLGKVVAKEGSGATERITIDYGGGTGRVTLLTAGGIPGEKL
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgactagctcttctgtgccttccgccgtgccctctgccggggtcccgccgaccgacccg
gcgatcacccgcctgctcgatggtctcaacccccagcagcgtgccgcggtgctgcacacc
ggggcgccgctactcatcgtcgcgggcgccggatcgggtaagaccgcggtgctcacgcgc
cgcatcgcctacctgctggcggcgcgtgacgtgtcccccgggcaggtcctggcgatcacc
ttcaccaacaaggcagccgcggagatgcgcgagcgggtgatcgatctcgtcgggccccgg
gccacctacatgtgggtgtccaccttccactcgacctgtgtgcgcatcctgcgcgcgcag
tcgggcttgctggccgggatgaactcgaacttctccatctacgacgccgacgactccaaa
cgactgctcggcatgatcatccgggacctcgaactcgaccccaagaagttcagtccgcgc
ggggtgggcgtggcgatctcgaacttcaagaacgagctcgtcggacccgagcaggccgtc
gaggccgcggcgtcggacgagccggcggcgcagcagatcgcgcggatctacgccgagtac
cagcgtcggctacgggcggccaacgccttcgacttcgacgatctgatcggcgagaccgtc
gcgctgctgcacgctcaccccgaggtcgccgagtactaccggcggcgcttccggcacgtg
ctggtcgacgagtatcaggacaccaaccacgcgcagtacgtgctcatccgcgaactcgtc
ggcgaggtcccgaccgctggcggcctcgagccgtcggagttgtgtgtggtgggtgacgcc
gaccagtcgatctacgccttccggggcgccaccatccgcaacatcgaagagttcgagcgc
gacttccccaacgcggaaaccattctgctggaacagaattaccgatccacccagaccatt
ctatcggcggccaacgccgtcatcgcgcgcaacgagaaccgccgggacaagcggttgtgg
accgattccggcgacggcgagctgatcgtcggctacgtcgccgattccgaccgcgacgag
tcgaccttcatcgccaaggagatcgagagcctcaccgactactcgatcggcgggtcctcg
agccacaagtactccgacatcgcggtgttctaccggaccaacaccggttcacgagccctc
gaagaggtctttgtgcggcacggcataccgtacaaggtggtcggcggtaccaaattctat
gagcgcaaagaggttcgggatgtggtggcctacctgcgggtggtggccaaccccgacgac
gcggtgagtctgcgccgcatcctcaacacgccgcgacgcggtatcggggaccgggccgag
gcgtgtgtcgcggtccattcggagaacaccggacgcagcttctacgagtcgctgatcgac
gccgcggcgggtaaggtcgcgatgctcaacacccgcgcgatcaaacagatcggcggcttc
gtggatctgatcgagggattgcgcaccgacttcctcaccgccttcggtgcggcgggtgag
tccgacgaggacgtggcgtttatcgatgccaccgaagagggtgccgacatcggcgaactg
gtggacgccatcgtcgagcggaccggttatcggggcgaactcgaggcgtccaacgacccg
caggatggcgcacgcctggacaacctgaacgaattgatctcggtggcacaggaattcagc
cgtgacgccgcggagctcgccgaggacgaagcggccgacgacgacgatccgctcgaatcc
ggccgcgacaccgagggggaacccgaccccgggtcgttggccgcattcctcgaacgtgtc
tcgctggtcgccgacgctgatcagcttcccgacgagggcgagggtgtggtgacgatgatg
accctgcacaccgccaagggactggagttcccggtggtcttcgtaaccggttgggaggac
gggcatttcccgcacatgcgggccatgggcgatccggccgaactcagtgaggaacgccgg
ctcgcctacgtggggatcactcgggccaaggagcggctgtatctgacccgctccatcacc
cgggcctcgtgggggcagccggtgtcgaatccggaatcgcgcttcctacaagagattccg
cagcatctgctggattggcggcggaccgagccgcggcggacccagagccggttcggtggt
tcgtcgggcgggatcttcggacgcgacggcgcgacgtcgtcgggtctacggggccggtcg
tcgtattcgtcggatccgtcgcggggacgcaataccttcgtgaactacgaggtgggggac
cggcacaaccaccccaagtacggactcggcaaggttgtcgccaaggagggaagcggcgcg
accgagcggatcaccatcgactacggcggcgggaccgggcgggtcaccctgctgaccgca
ggcgggatcccgggcgagaagctctag
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