Gordonia bronchialis: Gbro_2164
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Entry
Gbro_2164 CDS
T01102
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gbr
Gordonia bronchialis
Pathway
gbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gbro_2164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbr03019
]
Gbro_2164
03016 Transfer RNA biogenesis [BR:
gbr03016
]
Gbro_2164
Enzymes [BR:
gbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Gbro_2164
Messenger RNA biogenesis [BR:
gbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Gbro_2164
Transfer RNA biogenesis [BR:
gbr03016
]
Prokaryotic type
tRNA degradation factors
Gbro_2164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ACY21413
UniProt:
D0LBJ9
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All DBs
Position
2296289..2298568
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AA seq
759 aa
AA seq
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MTDVTTTEGLDDYDEAITEATAVIDNGSFGTRTIRFETGRLALQAAGSVTAYLDDENMLL
STTAASKHPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRP
SFVDGLRNEIQVVVTVMSLNPNDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIPTEE
NKAGQWVAFPTVEQLEGAVFDMVVAGRIVSGEGDAADVAIMMVEAEATDKVLEIIAGGAQ
APTEAIVAEGLEAAKPFIARLCEAQKSLAAAAAKETGEFPLFPPYASDAYDAVEAAAKDR
LSEILTIPGKQERDEKTDELKDDILAQLGEQFEGREKEIGAAYRSVTKKLVRQRILTDHF
RIDGRGITDIRSLSAEVAVIPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSK
RYMHHYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALSS
NGSTSMGSVCASTMSLLNAGVPLKAPVAGIAMGLVSDTVDGETRYVALTDILGAEDAFGD
MDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAKDARLTILDVMAEAIDEPDEMSPY
APRITTVKIPMDKIGELIGPKGKTINGITEDTGANISIEDDGTVFVGATDGPSAQAAIDR
INAIANPQLPKVGERFLGTIVKTTAFGAFVSLLPGRDGLVHISKLGKGKRINKVEDVVNV
GSKLRVEIADIDDRGKISLVPVDDDAAAEAQAEAATADA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgtgaccaccaccgaaggcctcgacgactacgacgaggccatcaccgaggcg
accgccgtcatcgacaacggcagcttcggcacccgcaccatccgtttcgagacgggccgt
ctggccctgcaggccgccggatcggtgaccgcctacctcgacgacgagaacatgttgctc
tcgaccaccgcagcgtcgaagcaccccaaggagcatttcgacttcttcccgctcaccgtg
gacgtcgaggagcggatgtacgccgccggacgcatccccggatcgttcttccgccgtgag
ggacgcccgtcgaccgacgccatcctcacctgccgcctgatcgaccgtccgctgcgcccg
tccttcgtcgacggcctgcgcaacgagatccaggtcgtggtgacggtgatgagcctcaac
cccaacgacctctacgacgtcgtcgccatcaacgcggcgtcggcctccacgcagctcgcg
ggcctgccgttctccggcccggtcggcggtgtgcgcgtggcgctcatccccaccgaggag
aacaaggccggccagtgggtcgcgttcccgactgtcgagcagctcgaaggcgcagtcttc
gacatggtcgtcgcgggtcgcatcgtctccggcgagggggatgccgctgacgtcgcgatc
atgatggtcgaggccgaggccaccgacaaggtcctcgagatcatcgccggcggcgcgcag
gcgccgaccgaggccatcgtcgccgaaggtctcgaggccgccaagccgttcatcgcccgc
ctgtgtgaggcccagaagtcgctggctgcggccgcggccaaggagaccggcgagttcccg
ctgttcccgccgtatgcctccgacgcctacgacgccgtcgaggccgccgcgaaggatcgg
ctctcggagatcctgacgatccccggcaagcaggagcgcgacgagaagaccgacgagctc
aaggacgacatcctcgcccagctcggcgagcagttcgaaggacgcgagaaggagatcggt
gcggcttaccgttcggtcaccaaaaagcttgtgcgccagcgcattctgaccgatcacttc
cgcatcgacggtcgcggcatcaccgacatccggtcgctgtcggccgaggtcgcggtcatc
ccacgcgcccacggcagcgccctgttcgagcgcggcgagacccagatcctgggcgtcacc
accctcgacatggtcaagatggcccagcagatcgactcactcgggccggagacctccaag
cgctacatgcaccactacaacttcccgccgtattcgaccggtgagaccggccgggtgggc
tcgcccaagcgtcgcgagatcggtcacggcgcgctcgccgagcgtgccctggttccggtg
ttgccgagcgtcgaggagttcccgtacgcaatccgccaggtgtcggaggcactcagctcc
aacggctcgacctcgatgggttcggtctgcgcgtcgaccatgtcgctgctgaatgccggt
gtgccgctgaaggccccggtcgccggtatcgccatgggactggtctccgacactgtcgac
ggggaaacccgctatgtggcgctgaccgacatcctcggtgcggaggacgctttcggcgac
atggacttcaaggtcgccggcaccaaggacttcgtcaccgcgctgcagctcgacaccaag
ctcgacggtattccgtcgcaggtgctcgcgggtgcgctcagccaggccaaggacgcccgg
ctgaccatcctcgacgtgatggccgaggccatcgacgagcccgacgagatgagcccgtac
gcgccgcggatcaccaccgtgaagatcccgatggacaagatcggtgagctgatcgggccc
aagggcaagacgatcaacggcatcaccgaggacaccggcgccaacatctccatcgaggac
gacggcaccgtgttcgtcggcgccaccgatggaccgtcggcgcaggcggcgattgatcgc
atcaacgcgatcgccaacccgcagctgcccaaggtgggcgagcgtttcctgggcacaatc
gtcaagacgaccgccttcggtgcgttcgtgtcgctgctcccgggtcgcgacggcctggtg
cacatctccaagctcggtaagggcaagcgcatcaacaaggtcgaagacgtggtgaacgtc
ggctccaagctccgcgtggagatcgccgacatcgacgaccgcggcaagatcagcctggtg
ccggtcgacgacgacgccgcggccgaggctcaggcggaggctgccaccgccgacgcctga
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