Gordonia bronchialis: Gbro_2886
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Entry
Gbro_2886 CDS
T01102
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gbr
Gordonia bronchialis
Pathway
gbr03030
DNA replication
gbr03410
Base excision repair
gbr03420
Nucleotide excision repair
gbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gbro_2886
03410 Base excision repair
Gbro_2886
03420 Nucleotide excision repair
Gbro_2886
03440 Homologous recombination
Gbro_2886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbr03032
]
Gbro_2886
03400 DNA repair and recombination proteins [BR:
gbr03400
]
Gbro_2886
Enzymes [BR:
gbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gbro_2886
DNA replication proteins [BR:
gbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Gbro_2886
DNA repair and recombination proteins [BR:
gbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Gbro_2886
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gbro_2886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ACY22098
UniProt:
D0L9T3
LinkDB
All DBs
Position
complement(3085944..3088793)
Genome browser
AA seq
949 aa
AA seq
DB search
MSPAQSSTTATKTTTRGKKAERKPVLMLLDGHSLAYRAFFALPAENFKTATGQTTNAVYG
FTSMLINLLRDEEPTHIAAAFDVSRKTFRSEMYPAYKAQRSKSPDEFNGQVDLTKEVLDA
LGIPVMAIEGYEADDIIATLATQADAEGYSVLVVTGDRDSLQLVNDSVTVLYPRKGVSEL
TRFTPAEVEKKYGLTPTQYPDYAALRGDPSDNLPGIPGVGEKTASKWIREYGSLASLVDH
VDEVKGKVGDALRANLASVQTNRQLTELVRDMQLPAGPDELAMVGWDRDRIHQLFDDLEF
RVLRDRLFSTLSSATPEAESGFDLDGAVLGQGEVRAWLAEHAGTGRSGLAVTAPHVVVGA
DPTGLAIAAADGTSAYVDVTAVDADDEQALADWLADPAMGKALHEVKWGIHALRSRGWTL
AGVTSDTSLAAYIVRPGQRTFNLDDLALRYLRRELRADDGSGDGQLSLLDDDGGAAKLAE
QHMLEARAVVELAEVLDTELDRIDSLPLLTEMELPLAFVLADLEAAGIAVDVDHFGELEK
NFAQRIRVAANAAYDVIGEQINLGSPKQLQTVLFDKLDMPKTKKTKTGYTTDADALQALY
EKTEHPFLAHLLEHRDATRLKVTVDGLLKSVADDGRIHTTFNQTIAATGRLSSTEPNLQN
IPVRTAAGREIRQGFIVGAGSGASGDGGVGAGSGASGPDGVGAGSGSSGHDGGTGDGFDC
LMTADYSQIEMRIMAHLSEDAGLIEAFNTGEDLHNFVGSRAFGVPIDEVTTEMRHRVKAM
SYGLAYGLSAFGLAAQLKISRDEAKEQMDAYFARFGGVRDYLHDVVAEARRNEYTATLFG
RRRYLPDLNSDNWQRRQSAERMALNAPIQGTAADIIKVAMINVHKRLQSEELRSRMLLQV
HDELVVEVATGERDAVEAVVREEMGAAITLSVPLEVSVGFGRSWDDAAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcccgcgcagagttccacgacagcgaccaagacgaccacccggggtaagaaggcc
gagcgcaagccggtactgatgctcctcgacggccattcactggcctaccgtgcgttcttc
gcgctgcccgccgagaacttcaagaccgcgaccgggcagaccaccaacgctgtctacggc
tttacgtcgatgctcatcaacctgctccgcgatgaggaaccgacgcacatcgcggccgcc
ttcgacgtctcgcgcaagaccttccgctcggagatgtaccccgcgtacaaggcgcaacga
tccaagtcgccggacgagttcaacggtcaggtcgacctcaccaaggaagtgctcgacgcc
ctgggtatcccggtgatggcgatcgaggggtacgaggccgacgacatcatcgccacgctc
gccacccaggccgacgccgagggctactcggtgctggtcgtcaccggcgaccgcgattcg
ttgcagctggtcaacgactcggtgacggtgctctacccgcgcaagggggtctcggagctg
acgcggttcaccccggccgaggtggagaagaagtacgggttgacgccgacacagtatccg
gactatgcggcgctgcgtggtgaccccagcgacaaccttcccggcattccgggtgtgggg
gagaagacggcctcgaagtggattcgggagtacggctcgctggcctccctcgtcgatcat
gtcgacgaggtgaagggcaaggtcggcgacgcactgcgcgcaaacctggcgtcggtgcag
accaatcgtcagctcaccgaactggtccgcgacatgcaactgccggccgggcccgacgaa
ctggccatggtcggctgggaccgcgaccgcatccaccagctcttcgacgatctcgagttc
cgagttctgcgcgatcgactgttctcgacgctgagttccgcgacgcccgaagcggaatcg
ggcttcgatctggacggagctgtgttggggcagggcgaggtgcgggcgtggctcgccgag
cacgccggcaccggacgcagcggactcgcggtcaccgcaccgcatgtggtggtcggcgcc
gaccccaccggcctggcaatcgccgctgccgacggcacctcggcctacgtcgatgtcacc
gccgtcgacgccgacgacgagcaggcccttgccgactggcttgccgaccccgcgatgggc
aaggccctgcacgaggtcaagtgggggattcatgcgttgcggtcgcggggctggacgctc
gccggggtcaccagtgacacgtcgctggcggcctacatcgtgcggcccggtcagcgcacc
ttcaacctcgacgacctcgccctgcgctacctccgtcgtgagttgcgtgccgacgacggg
tccggtgacgggcagctctcgctgctcgacgacgacgggggagccgcgaagctcgccgaa
cagcacatgctggaagcgcgcgccgtcgtcgaactggccgaggtcctcgacaccgagctc
gaccggatcgactcgctgccgttgctcaccgagatggagttgccgctggcctttgtgctg
gccgatctcgaagcggcgggcatcgcggtggacgtcgaccacttcggcgagttggagaag
aacttcgcgcagcgtatccgcgtcgcggccaacgccgcctatgacgtcatcggcgagcag
atcaacctcggctcacccaagcagttgcagacggtgctctttgacaaactcgacatgccg
aagacgaagaagaccaagaccgggtacaccaccgatgctgatgcgctgcaggccttgtac
gagaagaccgagcacccgttcctcgctcatctcctcgagcatcgcgacgccacccggctg
aaggtgaccgtcgacggcctcctgaagtcggtggccgacgacgggcgaatccacaccacc
ttcaaccagacgatcgcggcgacgggccggttgtcttcgaccgaaccgaatctgcagaac
atcccggtccgcaccgccgcgggacgggagatccggcagggcttcattgtgggcgccggg
agcggagcgagcggggatggtggtgtgggcgccgggagcggagcgagcgggcccgatggt
gtgggcgccgggagcggatcgagcgggcacgatggtggtaccggcgatggcttcgactgc
ctgatgaccgccgactacagccagatcgagatgcggatcatggcgcacctgtccgaggac
gccgggctgatcgaagcgttcaacaccggggaggacctgcacaacttcgtcgggtcgcgc
gccttcggcgtgccgatcgacgaggtgaccaccgagatgcgtcatcgggtgaaggccatg
tcgtacggacttgcctacgggctcagtgcctttggtctcgccgcgcagctcaagatcagc
cgtgacgaggccaaggaacagatggacgcctacttcgcgaggttcggcggggtgcgcgac
tacctgcacgacgtcgtcgccgaggcgaggcgtaacgagtacaccgcaacactgtttggt
cgtcgccgctatctgccggacctcaacagcgacaactggcagcggcgtcagtcggccgag
cggatggcgctcaacgcccccatccagggcaccgccgccgacatcatcaaggtcgcgatg
atcaacgtgcacaagcgacttcagtccgaagagctcagatcacggatgctgctgcaggtg
cacgatgaactcgtcgtcgaggtggcgacgggtgaacgtgacgccgtcgaggcggtggtg
cgcgaggagatgggtgccgcgatcacgctgtcggtgcccctggaggtgtcggtcgggttc
gggcggtcctgggacgacgcggcccactga
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integrated database retrieval system
