Gordonia bronchialis: Gbro_2993
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Entry
Gbro_2993 CDS
T01102
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gbr
Gordonia bronchialis
Pathway
gbr03030
DNA replication
gbr03430
Mismatch repair
gbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gbro_2993
03430 Mismatch repair
Gbro_2993
03440 Homologous recombination
Gbro_2993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbr03032
]
Gbro_2993
03400 DNA repair and recombination proteins [BR:
gbr03400
]
Gbro_2993
Enzymes [BR:
gbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gbro_2993
DNA replication proteins [BR:
gbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gbro_2993
DNA repair and recombination proteins [BR:
gbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gbro_2993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACY22201
UniProt:
D0LAQ8
LinkDB
All DBs
Position
complement(3199673..3203215)
Genome browser
AA seq
1180 aa
AA seq
DB search
MTDSFVHLHNHTEYSMLDGAAKVAPLFAEAKRLGMTAIGMTDHGNMFGASEFYNTAVKND
IKPIIGIEAYVAPASRFETKRVTWGTRDQKDDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASIEGQLGKWARMDADIIAEYAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKWQEI
FGKENFYLELMEHGLEIERRVRDGLLEVGRKLGIKPLVTNDCHYVTKDHAKSHEALLCVQ
TGKTLSDPTRFKFDGDGYYLKSAAEMRELWDSVVPGACDNTLEIGERVQSYADVFTHRDR
MPVFPVPEGESQQTWLRKEVAKGLAERRFAGAEVPREYQERANYELDVIIQMGFPAYFLV
VGDLIRHAQEVGIRVGPGRGSAAGSLVAWALGITNIDPIPHGLLFERFLNPERVSMPDID
IDFDDRRRGEMVRYATDRWGSDKVAQVITFGTIKTKAAIKDSARVQFGQPGFSIADRITK
ALPPPIMAKDIPVWGITDPDHERFNEAAEVRSLIETDPDVKKIYDTALGLEGLIRNAGVH
ACAVIMSSEPLTDAIPVWRRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIEN
IKINRGFDLDLDDAPLDDPKTYELLARGDTLGVFQLDGGAMRELLKRMQPTGFEDIVAVL
ALYRPGPMGMNAHNDYADRKNGRQEVKPIHPELAEPLKEILADTYGLIVYQEQIMQIAQK
VAGYSLGRADILRRAMGKKKAEVLAAEFEGFEAGMKANGFSGPAIKALWDTILPFAGYAF
NKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAIYLADCRKLGITVLPPDV
NESQRNFAAVGTDIRFGLAAIRNVGSGVVSSILAAREEKGKFTSFSDYLGKIDVTACNKK
VTESLIKAGAFDSLAHPRKGLFLVHGEAVESVLGTKKAEAIGQFDLFGDAGGADDTMAEV
FAVKVPDEEWDTKHKLAIEREMLGLYVSGHPLSGVEHAIAAHTDTSITTLLEGNIADGAQ
ITIGGIISSVTRRVNKKGEPWAAVTLEDMVGGVEVYFFPRAFAAYGMDIVADNIVLIKAR
VNLRDDSMMISANDLAVPDLSSAGATKPVALTLSARLCTPDRVQALKQVLTRHPGSADVH
VTLVSDERQTQLRLTESLRVTPSSALMGDLKALLGPSCLG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgattcgtttgtccatctgcacaaccacaccgagtactcgatgctcgacggtgcc
gccaaggtggcgccgctgttcgcggaggccaaacggctgggcatgaccgccatcggcatg
accgaccacggaaacatgttcggcgccagtgagttctacaacacggcagtcaagaacgac
atcaagccgatcatcggcatcgaggcctacgtcgcgccggcgtcgcgcttcgagaccaag
cgcgtcacgtggggtacccgcgatcagaaggacgacgacgtctcgggtagcggcgcctac
acccacatgaccatggtggccgagaacgccaccggtctgcgcaacctgttcaagctgtcg
tcgctggcctccatcgaaggacagctcggcaagtgggcgcgcatggacgccgacatcatc
gccgaatacgccgagggcatcatcgcgaccaccggctgtccgtccggcgaggtccagacc
cgcctgcgcctcgggcatgagcgtgaggcgctcgaggcggcggccaaatggcaggagatc
ttcggcaaggagaacttctacctcgaactcatggagcacggcctcgagatcgagcggcgg
gtccgcgacgggctgctcgaggtcggccgcaagctcggcatcaaaccgttggtgaccaac
gactgccactacgtaaccaaggatcacgccaagagccacgaggcgctgctgtgcgtacag
accggtaagaccctctccgacccgacccgcttcaagttcgacggcgacggttactacctg
aagtccgccgccgagatgcgcgagctgtgggattcggtggttccgggcgcctgcgacaac
accctggagatcggcgaacgggtccagagctacgccgacgtcttcacccaccgcgaccgt
atgccggtcttcccggtgcccgaaggcgaatcccagcagacgtggttgcgcaaagaggtc
gccaagggtctcgccgaacgccgcttcgcgggcgccgaggtgccgcgggagtatcaggag
cgcgcgaactatgagctcgacgtcatcatccagatggggttcccggcctacttcctggtg
gtcggcgacctcatccggcacgcccaggaggtcggcatccgcgtcggaccgggccgtgga
tcggcggccgggtccctggtcgcgtgggcgttgggcatcaccaacatcgaccccatcccg
cacggactgctatttgagcggttcctcaaccccgaacgcgtctcgatgcccgacatcgac
atcgacttcgacgatcgtcggcgcggtgagatggtgcgctacgccaccgaccggtggggc
agcgacaaggtcgcccaggtcatcaccttcggcaccatcaagaccaaggctgccatcaag
gactccgcccgggtgcagttcgggcagcccggcttctccatcgccgaccggatcaccaag
gcgctgccgccgcccatcatggccaaggacatcccggtctggggcatcaccgatccggat
cacgaacggttcaacgaggccgccgaggtccgctcgctcatcgagaccgatcccgacgtc
aagaagatctacgacaccgcactgggcctggaaggcctgatccgcaacgccggtgtgcac
gcgtgtgcggtgatcatgtcctcggagccgctcaccgacgccatcccggtgtggcggcgc
gcccaggacggcgccatcatcaccggctgggattacccgtcctgtgaggccatcggcctg
ttgaagatggacttcctggggttgcgcaacctcaccgtcatcggtgacgccatcgagaac
atcaagatcaaccgcggcttcgatctcgacctcgacgacgccccgctcgacgaccccaag
acctacgagctgctcgcccgaggtgacacgctgggcgtgttccagctcgacggcggggcc
atgcgcgaactcctgaaacgcatgcagcccaccggattcgaggacatcgtcgccgtcctc
gcgctctatcggccgggtccgatgggcatgaacgcccacaacgattacgccgaccgcaag
aacggtcgccaagaggtcaaaccgatccatccggaattggccgagccgctcaaggagatt
ctcgccgacacctacggtctgatcgtctaccaagagcagatcatgcagatcgcgcagaag
gtggccgggtactcactcggccgagccgacatcctgcgccgcgcgatgggcaagaagaag
gccgaggtcctcgccgccgaattcgaggggttcgaggcgggcatgaaggccaacgggttc
tccgggccggccatcaaggcgctctgggacacgatcctcccgttcgccggatacgcgttc
aacaagtcccacgccgccggctatgggctcgtctcgttctggacggcctacctcaaggcg
aattatcccgccgagtacatggccgggctgctcacctccgtcggcgacgacaaggacaag
gccgcaatctatctcgccgactgccgcaagctcggcatcacggtgctaccacccgacgtc
aacgagtcccagcgcaacttcgcggccgtcggcaccgacatccgcttcggcctggccgcc
atccgcaacgtcggcagcggggtggtctcctcgatcctggccgcgcgcgaggagaaggga
aagttcaccagcttctcggactatctcggcaagatcgacgtcaccgcctgcaacaagaag
gtgacggaatcgctgatcaaggccggtgccttcgactcgctggcgcatccgcgcaagggt
ctgttcctggttcacggtgaggccgtcgaatcggtgctcggcaccaagaaggccgaggcc
atcggacaattcgatctgttcggcgatgcgggcggagccgacgacaccatggccgaggtc
ttcgcggtcaaggtgcccgacgaggagtgggacaccaaacacaaactcgccatcgagcga
gagatgttggggctctacgtgtccgggcatccgctcagtggcgtcgaacacgcgatcgcc
gcacacaccgacacctcgatcaccaccctgctcgaaggcaacatcgccgacggcgcccag
atcaccatcggcggcatcatctcgtcggtgacgcgccgggtgaacaagaagggcgaaccg
tgggcggcggtcaccctcgaggacatggtcggtggtgtggaggtgtacttcttcccgcgt
gctttcgccgcctacgggatggacatcgtcgccgacaacatcgtgctcatcaaggcgcgg
gtcaacctgcgcgacgattcgatgatgatctcggccaacgacctcgccgttcccgatctg
tcgtcggcgggcgccaccaaacccgtcgccctcaccctgtccgcgcggttgtgtacaccc
gaccgggtccaggccctcaagcaggtactcacccggcatcccgggagcgcggatgtgcac
gtcacgctggtcagtgatgaacggcagacgcaacttcggctcacggagtcactgcgggtg
acgccgtcgtcggcgctgatgggtgacctcaaggcactgctcggcccgagctgtctgggc
tga
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