Gordonia bronchialis: Gbro_3315
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Entry
Gbro_3315 CDS
T01102
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
gbr
Gordonia bronchialis
Pathway
gbr00300
Lysine biosynthesis
gbr01100
Metabolic pathways
gbr01120
Microbial metabolism in diverse environments
gbr01230
Biosynthesis of amino acids
Module
gbr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Gbro_3315
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gbr01002
]
Gbro_3315
Enzymes [BR:
gbr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Gbro_3315
Peptidases and inhibitors [BR:
gbr01002
]
Metallo peptidases
Family M20
Gbro_3315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ACY22519
UniProt:
D0LD26
LinkDB
All DBs
Position
complement(3545485..3546579)
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AA seq
364 aa
AA seq
DB search
MAAVLDLTADPVDLTAALVDIESESRNEGPIADAVESALRAQTSGFEVIRHGNQVLARTD
RGRDRRVILAGHLDTVPVAGNLPHRRTSDDAEGDVLHGCGTVDMKSGDAVFLHLAATLTD
PGPDLTLIFYDCEEIAAQYNGLGFIERELPDWLVGDVAILGEPTAGQIEAGCQGTLRVRL
STAGTRAHSARSWMGDNAIHKLGAVLTTLAAYTPRRVDIDGCEYREGLSAVGLGGGVAGN
VIPDAAHVDVNFRFAPDRSEEQAVAHVREVFAEQLSDGVTLEVTDSAAGALPGLGHPAAA
ALVAAADGRFRAKYGWTDVARFSARGIPAVNLGPGDPNLAHRVDERVPVDQIRDVTSILR
DYLS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagtcctcgacctcaccgccgatcccgttgatctgaccgcggcgctcgtcgac
atcgagagcgaatcgcgcaacgagggaccgatcgccgacgccgtcgaatccgctttgcgg
gcacagacatccggcttcgaggtgatccggcacggcaaccaggtgctggcgcgcaccgat
cggggccgggaccgccgggtgatcctggccgggcatctcgacaccgtgccggtggcgggt
aacctcccgcaccgtcgcacatccgacgacgccgaaggtgacgtcctgcacggatgcggc
accgtcgacatgaagtccggtgatgccgttttcctgcacctggccgcgacgctcaccgac
ccggggccggacctcacactgatcttctacgactgcgaggagatcgccgcgcagtacaac
gggctcgggttcatcgaacgcgagttgccggactggctcgtcggcgacgtggcaatcctc
ggcgagccgacggccggccagatcgaggcgggctgtcaggggacgctgcgggtccggttg
tcgaccgcgggtacgcgggcccattcggcacgatcgtggatgggcgacaacgcgatccac
aaactcggtgccgttctcaccacgctggccgcctacaccccgcgtcgggtcgacatcgac
ggatgtgaataccgcgagggactctcggccgtcggcctcggcggcggggtggccggcaac
gtgatccccgacgccgcccacgtcgacgtcaacttccggttcgcgcccgatcgttccgag
gagcaggcggtggcccatgtgcgggaggtcttcgccgagcagctctcggacggggtgacg
ctcgaggtcaccgactcggcggccggcgctctgcccgggctcggccatccggccgcggcg
gcgctggtggcggcggccgacggtcgattccgtgccaagtacggctggaccgacgtcgca
cggttctccgcgcggggcatcccggcggtcaacctcgggcccggcgatcccaacctggcc
catcgcgtcgacgagcgggtgcccgtcgaccagatccgcgacgtgaccagcatcctgcgc
gactatctgagctga
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