Gordonia bronchialis: Gbro_3496
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Entry
Gbro_3496 CDS
T01102
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbr
Gordonia bronchialis
Pathway
gbr03420
Nucleotide excision repair
gbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Gbro_3496
03430 Mismatch repair
Gbro_3496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbr03400
]
Gbro_3496
Enzymes [BR:
gbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gbro_3496
DNA repair and recombination proteins [BR:
gbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gbro_3496
MMR (mismatch excision repair)
Other MMR factors
Gbro_3496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ACY22689
UniProt:
D0LE97
LinkDB
All DBs
Position
complement(3713659..3715812)
Genome browser
AA seq
717 aa
AA seq
DB search
MADDIVDRVSDPFPEPDAADPIIADPIIGGLDPEQRAAVLAPRGPVCVLAGAGTGKTRTI
TRRIAHLIDTGQVNPGQVLAVTFTARAAGEMRGRLRSLGIGGTRGTESVAAATFHAAAMR
QLRYFWPRAFGNARWELLDNKFPVISRSARRAGLDTATDTIRDLASEIEWAKASLIDPEH
YVEAVTRADRDTPAPAAKVAAVYSHYEDAKVSADGDRMLDFDDLLIYMTQILVADPGVAE
EFRARYRCFVVDEYQDVTPVQQGLLNAWLGDRDDLTVVGDANQTIYTFTGATPTYLLDFG
RRFPEATVVRLIRDYRSTPQVVDLANRVIGAARGRIAGTRLRLVGQRDPGPEPQFAEYDD
EPKAATEVTAEISKLIDAGVLPAEIAILYRVNAQSETYEQALTEAGIPYQVRGGEAFFTR
TEIRQAMRQLTVVAGRELPDGADVAAVVRAVLGELGLSQEEPSGAQARSRWQSLNALATL
TDDLVAENAALTLPELTAELSARAAARHPPTVQGVTLSSLHAAKGLEWDAVFLVGLIDGS
LPINQAIKASWEEVEEERRLFYVGVTRAREHLHISWPLARNEGGRARRRSRFLTDLVPDD
SPASRVAPERKPRRGPVCRVCGSRLMDSTATLLGRCADCPSDLDEELLIALKDWRRERAQ
AKQVPAFVVFSDKTLTAIAEQRPTDNAALVSISGIGASKLVEYGDDIIGLIKNRRDG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatgacatagtggatcgcgtgtccgatccgttccccgaacccgatgccgcagac
ccgatcatcgccgatccgatcatcgggggtctcgaccccgaacagcgtgcggcggtcctc
gctccgcgggggccggtgtgtgtgctggccggggccggaaccggcaagacgcgcaccatc
acacgccggatcgcgcacctcatcgacaccggacaggtgaacccggggcaggtgctcgcg
gtgacgttcaccgcccgcgccgccggcgagatgcgcggccggctgcgatcgctcggcatc
ggcgggacacggggcaccgagagtgttgccgcggcaaccttccacgccgcggcgatgcgg
cagctgcgctatttctggccgcgcgccttcggcaacgcccgctgggaactgctggacaac
aagttcccggtcatctcccgctcggcccgacgcgccggtctggacaccgcgaccgacacc
attcgcgacctggcgtcggagatcgagtgggccaaggcctcgctgatcgacccggaacac
tatgtggaggcggtgacccgcgccgatcgggacactcccgcgccggccgccaaggtggct
gccgtctactcccactacgaggacgccaaggtctccgccgacggggaccggatgctcgac
ttcgacgatctgctcatctacatgacgcagatactcgtcgcggatcccggtgtggcagaa
gagttccgcgcgcgttaccgatgcttcgtcgtcgacgagtaccaggacgtcacacccgta
cagcagggattgctcaacgcgtggctcggcgatcgcgatgacctgaccgtcgtcggggac
gccaaccagaccatctacacgttcaccggtgccacgccgacctacctgctggacttcggg
cggcggttcccggaggcgacggtggtgcggctcatccgcgactaccggtccaccccgcag
gtcgtcgacctcgccaaccgggtgatcggcgcggcccgcgggcggatcgccgggacccgg
ctgcgactcgtcgggcaacgcgaccccggaccggaaccgcagttcgccgaatacgacgac
gagccgaaggccgcgaccgaggtgaccgcggagatcagcaaactcatcgacgccggggtg
ttgccggccgagatcgcgatcctctaccgggtcaacgcgcagtcggagacctacgagcag
gccctcaccgaggcgggcatcccgtatcaggtgcgcggcggtgaggcgttcttcacccgg
accgagatccggcaggcgatgcgtcagctcaccgtggtggccgggcgcgagctacccgac
ggtgccgacgtcgccgccgtggtgcgcgcagtcctcggtgagctggggctctcccaagag
gaaccgtccggtgcccaggcgcgcagccgatggcagtcgctcaacgcgctggccacgctc
accgacgacctggtggccgagaacgccgcactcaccctccccgagctgaccgccgagttg
tctgcccgcgcggcggctcgtcatcctccgacggtgcagggcgtcacgctgtcgtcgttg
cacgccgcgaagggcctggagtgggatgccgtattcctcgtcggtctcatcgacggatcc
ctcccgatcaaccaggcgatcaaggcgtcctgggaggaggtcgaagaggagcgccggctg
ttctatgtgggtgtgacgcgggcgcgggagcacctgcacatctcctggccgttggcacgc
aacgagggcggccgtgctcgacgtcgctcccgcttcctcaccgacctggttcccgacgat
tcgcctgcgtcacgggtggcgcccgaacgcaaaccccgccgcggaccggtgtgccgggtg
tgtgggtcgcggctgatggattccaccgccaccctgctcggccggtgtgccgactgcccg
tcggatctcgacgaggaactgctgatcgcgctcaaggactggcggcgtgagcgcgcccag
gccaagcaagtacccgccttcgtggtgttctccgacaagacgctgaccgcgatcgccgag
cagcggcccaccgataatgctgcgctggtgtcgatttctgggatcggagcgtccaagctc
gtggagtacggcgacgacatcatcggcctcatcaagaaccggcgcgacggatag
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