Gordonia bronchialis: Gbro_4419
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Entry
Gbro_4419 CDS
T01102
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gbr
Gordonia bronchialis
Pathway
gbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Gbro_4419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbr03400
]
Gbro_4419
Enzymes [BR:
gbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Gbro_4419
DNA repair and recombination proteins [BR:
gbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Gbro_4419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACY23559
UniProt:
D0L6J9
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All DBs
Position
4727908..4728681
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AA seq
257 aa
AA seq
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MRIGAHLREDGDPLATAEELGIDVFQMFVTDPQSWKKPAPNPHAAEIRDSGVDVVVHSSY
QINVASLNNRLRMPSRKAVEQQAAAAAELGAFGLVVHGGHLRDGEDSAEGFANWRKLFDR
QVDKGGFGVPILIENTAGGDHAMARTLESIDRLWEAVGDFEQAGFCLDTCHAWAGGEDLV
GLVERIKAITGRIDLVHLNNSRDEFDSGRDRHANLESGHIDPAVLAAVAAAADAPVILET
PADGIPGDLAYLREALG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcggagcccaccttcgtgaagacggcgacccactcgccacggcggaagaactc
ggcatcgacgtcttccagatgttcgtcaccgacccgcagagctggaagaaacccgcaccc
aacccgcacgccgccgagatccgcgactccggcgtcgacgtggtggtgcactcgagctac
cagatcaacgtcgcgagcctcaacaaccggctgcgtatgccgtcgcgcaaagccgtcgag
caacaggctgccgcggccgccgaactcggcgccttcggcctcgtcgtacacggtgggcat
ctgcgcgacggtgaggattccgcggagggttttgccaactggcgcaaactcttcgaccgc
caggtagacaagggcggcttcggcgtcccgatcctcatcgagaacaccgccggtggtgat
cacgcgatggcgcgcaccctggagtcgatcgatcggctgtgggaggccgtcggcgacttc
gagcaggcgggtttctgcctcgacacctgtcacgcgtgggcgggcggtgaagatctggtg
ggactggtcgagcggatcaaggcgatcaccggacgcatcgacctcgtacacctgaacaac
tcacgcgacgagttcgactcgggccgcgaccggcacgcgaatctcgaatccgggcacatc
gatccggctgtcctggccgcggtcgccgcagccgctgacgcaccggtcattctcgagacc
ccggccgacggcatccccggcgacctcgcctatctgcgcgaagcactgggctga
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