Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0007
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Entry
GbCGDNIH4_0007 CDS
T03156
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs03030
DNA replication
gbs03430
Mismatch repair
gbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GbCGDNIH4_0007
03430 Mismatch repair
GbCGDNIH4_0007
03440 Homologous recombination
GbCGDNIH4_0007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbs03032
]
GbCGDNIH4_0007
03400 DNA repair and recombination proteins [BR:
gbs03400
]
GbCGDNIH4_0007
Enzymes [BR:
gbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GbCGDNIH4_0007
DNA replication proteins [BR:
gbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GbCGDNIH4_0007
DNA repair and recombination proteins [BR:
gbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GbCGDNIH4_0007
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
AHJ64363
LinkDB
All DBs
Position
7873..8898
Genome browser
AA seq
341 aa
AA seq
DB search
MKFDARQAEAFLRQPDQAVRAVLLYGDDHGLVRERGTSLTRLVAGQIDDPFRVIELAAEQ
AADLPNEMAGLSLTGGRRVIRIREAADIFAAPLQAGLERQGEALVILEAGTLTPRSKLRV
LAEKMASAASIACYPDEGRSLSQTIQDSLARDRVSIEADALKWLCDHLGADRALTRREID
KLALYVGQDGTATIEAAQACIGDLAGLSLEDALYASVIGDVSGAERALSLALAEGTTSIA
VVRMALQHMQRLRKLRAVMQENGTSAAEAVRQAKPPVFFKRVPAFTKALTLWRDEMLAAI
CDMLWQAEKACKQSGAPDEIICRQAVMSIALRARQAAARGV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgatgcacgtcaggcggaagcatttttgcgtcagcctgatcaggctgtgcgg
gctgtgctgctttacggggatgatcatggtttggtccgtgagcgcgggaccagtctgaca
cggctggtagcagggcagattgatgatccttttcgtgttatcgaactggccgcggaacag
gcggccgatcttcccaatgaaatggcgggtctgtccctgacgggcggccgtcgtgtcatc
agaatcagggaagcagctgacattttcgctgctcccctgcaggctggtctggagaggcag
ggggaagcgctggtcattctggaagcagggacattgacgccacgctccaagcttcgtgtg
ctggccgagaaaatggccagtgcagcctccattgcctgctatcccgatgaaggtagaagc
ctgtcccagaccattcaggattctctggcccgggatcgtgtttccattgaggctgatgcg
ctgaaatggctctgcgatcatctgggggctgatcgtgccctgactcggcgtgagatcgac
aagcttgccctgtatgtcggtcaggatggaaccgcgacgatagaggcagcacaggcctgt
attggcgacctcgccggattgtcactggaagatgccctgtatgcgtctgtcatcggtgac
gtttcaggcgctgaacgggctctgtcgctggctctggcggagggtacgacctcgattgcc
gtggtcagaatggcgcttcagcatatgcagcggcttcgcaagctgcgtgcggtgatgcag
gaaaacggaacaagcgcggctgaggctgtcaggcaggcaaagcctccggttttcttcaaa
cgggtacccgcttttacgaaggctctcacgctctggcgggatgagatgctggccgcgatc
tgcgacatgctttggcaggccgagaaagcctgtaagcagagcggcgcacctgatgagatc
atctgtcgtcaggcggtcatgagtatcgctctgcgggcacgtcaggctgctgccagaggg
gtttaa
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