Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0108
Help
Entry
GbCGDNIH4_0108 CDS
T03156
Name
(GenBank) Thiamine biosynthesis protein thiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs00730
Thiamine metabolism
gbs01100
Metabolic pathways
gbs01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GbCGDNIH4_0108
Enzymes [BR:
gbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
GbCGDNIH4_0108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
PTE
Motif
Other DBs
NCBI-ProteinID:
AHJ64475
LinkDB
All DBs
Position
116831..118663
Genome browser
AA seq
610 aa
AA seq
DB search
MTVQTKPTTVTLGPITGSRKIYVPVEGRDDMAIPFREIALDPSAREEPVRVYDTSGPYTD
PSSHIDLEQGLLPLRAPWLARRGYASVTPREVTAADNGYAPADRLVTPCPAPHTVFEGKP
GQLVTQLEFARAGIITEEMIYVAHRENMGRARLLEGAEARRADGEDFGASIPAFITPEFV
RAEVAAGRAIIPANINHPEIEPMAIGRNFLVKINANIGNSAVTSSAAEEVEKMVWATRWG
ADTVMDLSTGRNIHNIRGWIMRNSPVPIGTVPIYQALEKVGGEAEKLSWEVFRDTLIEQA
EQGVDYFTIHAGVRLAHVPLTASRVTGIVSRGGSIMARWCLSHHRESFLYERFDEICEIM
RKYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWDHGCQVMIEGPGHVPMHKI
KANMDKQLAVCGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLG
LPDRNDVKTGVITYRIAAHAADLAKGHPSARLRDDAVSRARFSFRWQDQFNLSLDPDTAQ
AFHDETMPKEAHKVAHFCSMCGPKFCSMKITQDLREEAARMAGMESKSAEFRDMGATLYV
PEHAPAKEDR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttcagaccaaacccaccactgtcacgcttggcccgattacgggctcccgcaaa
atttacgtgcctgtcgagggacgggacgatatggcgatcccgttccgggaaatcgcgctc
gatccttccgctagggaggagccggtgcgggtctacgatacatccggcccgtataccgat
ccatcctcgcatatcgatctggagcagggcctgctgccgctgcgtgcaccgtggctggcc
cggcgcggctatgccagcgtcaccccgcgcgaggtgaccgcggccgataacggctatgcc
ccggcggatcgtctggtgacgccctgtcccgccccgcatactgtgttcgagggcaagccg
ggccagttggtcacccagcttgaattcgcccgtgccgggatcatcacggaagagatgatc
tatgtcgcgcaccgcgaaaacatgggccgtgcccgcctgctggaaggggccgaggcccgc
cgcgccgatggcgaggatttcggtgccagcatccccgccttcatcacccccgaattcgtg
cgggccgaggtggcggcaggccgggccattattccggcgaacatcaatcacccggagatc
gagccgatggcgatcggccggaatttcctggtgaagatcaacgcgaatatcggcaactcc
gccgtgacgtcctccgccgcggaagaggtggagaagatggtctgggccacacgctggggc
gcggatacggtgatggatttgtccaccggccgtaacattcacaatatccgtggctggatc
atgcgcaactcgccggtgccgatcggcaccgtgccgatctatcaggcgctggagaaagtc
ggcggcgaggcggaaaagctgagctgggaagtgttccgcgacacgctgatcgagcaggcg
gaacagggcgtcgattacttcaccatccatgccggtgtgcggctggctcatgtgccgctg
acggcatcccgtgtgacgggaatcgtctcgcgcggtggctccatcatggcgcgctggtgc
ctgtcccatcaccgtgagagcttcctgtatgagcgcttcgacgagatttgcgagatcatg
cgcaaatacgacgtgtcgttctcgctcggggacgggctgcgtcccggctccatcgccgat
gccaacgatgccgcgcagttcgccgagctggaaacgctgggtgagctgaccaaaatcgcc
tgggaccatggttgtcaggtgatgatcgagggtccgggccatgtgccgatgcacaagatc
aaggccaacatggacaagcagctggccgtctgtggcgaggcgccgttctatacgcttggg
ccgctgaccacggatatcgcgcccggttatgaccatatcacctccgcgattggtgcggcg
atgatcggctggttcggcaccgccatgctctgctacgtcacgcccaaggagcatctgggg
ctgccggatcgtaatgacgtcaagacaggtgtcatcacctaccgcattgccgcccatgcc
gccgatctggccaaaggccatccctcggcccggctgagggatgatgcggtcagccgtgcc
cgcttctccttccggtggcaggatcagttcaacctgtcgctcgaccctgatacggcgcag
gccttccatgatgagaccatgccgaaagaggcgcacaaagtggctcatttttgctcgatg
tgcggcccgaaattctgttctatgaagatcacccaggatttgagggaagaagccgcacgc
atggcggggatggagtctaaaagcgccgagttccgcgacatgggtgcgacgctgtatgtg
ccggaacacgccccggcgaaggaggaccgctga
DBGET
integrated database retrieval system
