Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0129
Help
Entry
GbCGDNIH4_0129 CDS
T03156
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs00300
Lysine biosynthesis
gbs00470
D-Amino acid metabolism
gbs01100
Metabolic pathways
gbs01110
Biosynthesis of secondary metabolites
gbs01120
Microbial metabolism in diverse environments
gbs01230
Biosynthesis of amino acids
Module
gbs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GbCGDNIH4_0129
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GbCGDNIH4_0129
Enzymes [BR:
gbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GbCGDNIH4_0129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
AHJ64500
LinkDB
All DBs
Position
146736..148082
Genome browser
AA seq
448 aa
AA seq
DB search
MMDMHVTDTDRPDPSVMELIAARPSLSMHAMDGLLLDDVPLNTIADAQGTPCWVYSAGTF
RRRYRLLRDALAEAGIAPHIHFAVKANDHLAVLRLLGNEGAGADVVSGGELSRARAAGIP
GERIVFSGVGKTAAELTLALSEGIAQINVESAEELEMLSAIACGMGRTARIALRVNPDVD
AGTHPKITTGLADNKFGIQAGDVPALYARAASLPGIEPVGLAMHIGSQINVMTPFLAAFR
RMAILVQALRDQGLTVRLVDCGGGLGIDYRGDVTSTPAALAGAMKAELGGLDVQLVLEPG
RWLAGPAGVLLSSVVLVKQSRPRPFVVLDAAMNDLLRPSLYEAWHGIVPLSAVEAAHMPI
DCDVVGPVCETGDTFARSRSLPPLQAGSRVAILEAGAYGAVMSSTYNARPLAAQVLVDDG
HWTVIRPRQTVDALWRDEVIPPHLIRQG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgatggacatgcatgtaacggatacggaccgaccggatccttcggtgatggaactcatt
gccgcacgccccagcctttccatgcatgcgatggatggattgctgctggatgatgtgccg
ctgaataccattgccgatgctcagggcacgccgtgctgggtctattccgcgggtacgttc
cgccgtcgttaccggctgttgcgtgatgcgctggcggaggccgggatcgcgccgcatatc
catttcgcggtgaaggccaatgaccatcttgccgtgctgcgtctgctcggcaatgagggg
gcgggcgcggatgtggtcagtggcggtgaactcagccgtgcgcgggccgctggtattccg
ggggagcggatcgtgttctccggtgttggcaagaccgcggcagagctgacactggctctg
tccgaagggatcgcccagatcaatgtggagagcgcggaggagctggagatgctctccgcc
attgcctgcggtatgggccgcacggcgcggatcgcgctgcgggtcaatccggatgtggat
gccggtacacaccccaagatcacgacaggtctggccgataacaaattcggcattcaggcc
ggggatgtgcctgccctgtatgcgcgggctgcgtccctgccggggatcgaaccggtcggc
ctcgccatgcatatcggcagccagatcaatgtcatgacccccttcctggccgcattccgc
cgtatggcgattctggtgcaggcgctgcgggatcagggattgacagtcaggctggtggat
tgtgggggcggtctggggatcgattatcgcggcgatgtcacctccaccccggcggcgctg
gctggggcgatgaaggcggagctgggcggtctggacgtgcagctggtgctggagccgggg
cgctggctggccggtcctgccggtgtgctgctgtccagcgtcgttctggtgaagcagtcg
cgcccgcgtcctttcgtggtgctggatgcggcgatgaacgatctgctgcggccctccctg
tatgaggcatggcacggaatcgtgcccttatccgcggttgaggccgcgcatatgccgatc
gactgcgatgtggtgggtccggtctgcgaaaccggtgatacctttgcgcggtcgcggtcg
ctgccgccgcttcaggccggcagccgggtcgcaattctggaggcgggggcttacggtgcg
gtgatgagctccacatataatgccagaccgctggcggctcaggtgctggttgatgatggg
cactggacggtgatccgcccgcgtcagacggtcgatgcgttgtggcgtgatgaggtgatt
ccgccgcatctcatccggcagggctga
DBGET
integrated database retrieval system