Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0207
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Entry
GbCGDNIH4_0207 CDS
T03156
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs03420
Nucleotide excision repair
gbs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GbCGDNIH4_0207
03430 Mismatch repair
GbCGDNIH4_0207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbs03400
]
GbCGDNIH4_0207
Enzymes [BR:
gbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GbCGDNIH4_0207
DNA repair and recombination proteins [BR:
gbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GbCGDNIH4_0207
MMR (mismatch excision repair)
Other MMR factors
GbCGDNIH4_0207
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AHJ64579
LinkDB
All DBs
Position
240661..242937
Genome browser
AA seq
758 aa
AA seq
DB search
MTDHPSSPFPSSAAVPSEGGEAYLARLNPEQRAAVETIDGPLLVLAGAGTGKTRVLTTRF
AHILKSGRAFPNQVLAVTFTNKAAREMRERVGAILGEKVEGLWLGTFHALCARMLRRHAE
YVGLSSNFSILDSDDQMRLLKQVAETFRIDTKRWPLPGLMAAIQRWKDRGLTPERVTPVE
DTDYASGHAVAIYRAYQERLRALNAADFGDLLLFMTEILRSRPEVLSQYHRAFRYILVDE
YQDTNLVQYLWLRLLAQGRQNGDQNICCVGDDDQSIYSWRGAEVENILRFEKDFPGAHVV
RLESNYRSTAPILGAAAGLIAHNEGRLGKTLRPGRSNAEGEKVDVISLWDSDEEARMVGD
RIEMARRNRHPLSEIAVLVRAGFQTRSFEERLITLGVPYRVIGGLRFYERAEIRDAIAYA
RLLAQPSDDLAFERIVNVPRRGVGEVALRGLHERARADSVPLLEAASRQLADGKLRGKVK
EGIAAFLQGLESWRRMLGSEGHVATMATMLDESGYTEMWKQDKSPEAPGRLENLKELLRA
MAEFDALPGFLDHVSLVMENEQDAGDDKVSLMSLHAAKGLEFDMVFLPGWEEGLFPHQRA
LDEGGLKSLEEERRLAYVGLTRARQKAVISHAANRRIYANWQSAIPSRFIEELPPDCIQS
QGSAVMEREQRLRGGFGGGVQFPLLATRTAPRAAAPRVREAWEQPGRASQAGRFSVGSRV
FHDKFGYGTVTAVIDDRLDVTFDKAGTKRILDSFVEPR
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcatccttcatcgccgtttccttcttctgctgctgtcccgtctgaggggggg
gaggcgtatctggcgcgcctgaacccggaacagcgggcggcggtggagacaattgatggg
ccgctgctggtgctggccggggcgggcacgggcaagacacgggtgctgaccacccgcttt
gcccatattctgaaaagcgggcgtgcttttcccaatcaggttctggccgtcaccttcacc
aacaaggctgcccgggaaatgcgggagagggtcggcgcgatcctcggcgagaaggtggag
gggctgtggctcggcacattccatgcgctttgcgcccgtatgctgcggcggcatgcggag
tatgtcggcctgtcctcgaatttctcgattctcgacagtgatgaccagatgcgcctgctc
aagcaggtggcggagacgttccggatcgataccaaacgatggccgctgcccggcctgatg
gccgccatccaacgctggaaagatcgcggcctgacgcccgagcgtgtgaccccggttgag
gatacggattatgcctccggccatgctgtcgcgatctatcgggcctatcaggagcgactg
cgggcactcaatgcggctgatttcggtgatctgctgcttttcatgacggaaattctccgc
tcccggccggaagtgctgagccagtatcatcgggctttccgttacattctggtcgatgag
tatcaggatacgaatctggtccagtatctctggctgcgtctgctggcgcagggaaggcag
aacggggaccagaacatctgctgcgtcggggatgacgatcagagcatctattcctggcgc
ggggcggaggtggaaaacatcctgcgcttcgaaaaggatttccccggcgcgcatgtggtg
cggctggagagtaattatcgctcgaccgcccccattcttggcgctgcggccgggctgatt
gcgcataatgaagggcggctcggcaaaacgctgcgtccgggccggtccaatgcggaaggt
gagaaggtcgatgtcatctcgctgtgggattccgatgaggaagcccgcatggtgggggat
cgcatcgaaatggcgcgtcgtaaccgtcacccgttatcggagatcgcggtgctggtcagg
gccggctttcagacccgctccttcgaggaaaggctgattaccctgggcgtgccctatcgt
gtcattggtgggttgaggttctatgagcgggccgaaattcgcgatgcgatcgcttatgcg
cggttattggcccaaccttccgatgatctggcgttcgagcggatcgtgaatgtgccgcgt
cgtggcgtgggagaggtcgcgttgcgtggcctgcatgaacgggccagggccgattctgtc
ccgctgctggaagccgcttcacggcaactggccgatggtaaattgcgcgggaaagtgaaa
gagggcatcgctgccttcctgcagggtctggagagttggcggcgcatgctgggcagcgaa
ggccatgtcgccaccatggccaccatgctggatgagagcggctacacggagatgtggaag
caggataaatcacccgaggcgccgggccggctggaaaatctcaaggaattgctgcgggcc
atggccgagttcgatgctctgcccggttttcttgatcacgtctcgctggtgatggagaat
gaacaggatgcgggcgacgacaaggtcagtctgatgagcctgcacgccgccaagggactg
gaattcgatatggtattcctgcccggctgggaggaagggctgttcccccatcaacgggca
ctggatgaaggtggcctgaaaagcctggaggaggagcggcggctggcctatgtgggcctc
acgcgcgcgcgacaaaaagccgtgatcagccatgccgccaaccggcgcatttacgccaac
tggcagagcgccattcccagccgctttatcgaggaactgccgccggactgcatccagtcg
cagggctcggcagtgatggagcgggagcagcggttgcggggtggattcggcggtggcgtt
cagttcccgctgctggcgacccgtactgcaccccgggcggcagcaccacgggtgcgggaa
gcatgggaacagccgggccgggcatctcaggcagggcggttttcggtcggcagccgggtt
tttcatgacaaattcggctatggaacggtgacggcggtgattgatgaccgtctggacgtg
acattcgacaaggcaggcacgaaacgcattctcgacagtttcgtggaaccgcgatga
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