Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0326
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Entry
GbCGDNIH4_0326 CDS
T03156
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbs03400
]
GbCGDNIH4_0326
DNA repair and recombination proteins [BR:
gbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GbCGDNIH4_0326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
RecA
AAA_22
DUF7125
AAA_24
AAA_5
Lon_C
Rad51
NTPase_1
SLFN-g3_helicase
PAXNEB
AAA_30
nSTAND3
AAA
NACHT
GvpD_P-loop
A2L_zn_ribbon
ADK_lid
ATPase_2
Zn_ribbon_Nudix
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AHJ64715
LinkDB
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Position
complement(380686..382068)
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AA seq
460 aa
AA seq
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MVKDRARYVCQACGAVYPKWAGRCEACGEWNSIVEEAPSSAPVRVTPGRRLAFVSLPADG
VDAAPPPRIATGIEELDRVLGGGLVPGSVILVGGDPGIGKSTLMLQAAAALARAGGRALY
VSGEEAVEQVRLRARRLHLADAPLELAASGHVRDIAATLETARDAALVVIDSIQTMWLDS
LDSAPGTVAQVRACGFELIRLAKSVGFALVLVGHVTKEGAIAGPRVLEHMVDAVLYFEGD
RGHQFRILRGVKNRFGATDEIGVFEMTDLGLSEVANPSALFLAERRGNIAGSAVFAGMEG
SRPVLLEVQALLAPNAGGSPRRAVVGWDSARLGMLLAVLEARCGLKLAQNDVYLNIAGGL
RITEPAADLAVAAALISAATEQPVAANEVFFGEVGLSGEIRQVPQTEARLKEAAKLGFEA
ACRPRRVARGKNRPSPPEGLKLEEIGHLSDLVRRFVPDQP
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaagatcgcgcccgctatgtatgtcaggcctgcggagccgtttatcctaaatgg
gccggccgctgcgaagcctgtggcgaatggaacagcattgtcgaggaagcgccatcctct
gctccggtgcgggtcacgccggggcgcaggctggctttcgtcagcctgcctgccgatggc
gtggatgccgcccctcccccccgtattgcaaccgggattgaggagctggatcgtgtgtta
gggggcggcctggttcctggctctgtcattctggtggggggtgatcccggcatcggcaaa
tccaccctcatgttgcaggctgcggcggcgctggcgcgggcaggcggcagggcgctttat
gtctctggtgaagaagcggtggaacaggtccgcctgcgggcacgccgcctgcatctggcc
gatgcaccgctggagctcgccgccagcggccatgtgagggatatcgccgccacgctggaa
acggcccgtgatgcggcgctggtagtgatcgattcgatccagaccatgtggctggacagt
ctggacagcgcccccggcaccgtagcgcaggtccgtgcctgcggtttcgagctgatccgg
ctggccaaaagcgtcggcttcgcgctggtgctggtcggtcacgtcaccaaggaaggcgcc
attgccggtccgcgcgtgctggagcacatggtggatgccgtgctgtatttcgaaggtgac
cggggccatcagttccgcattctgcgcggcgtcaaaaaccgctttggtgccacggacgaa
attggcgtgttcgaaatgaccgatctgggtctgtctgaagtcgccaacccatccgccctg
tttctggcggaacgacgcggtaatatcgccggcagcgcggttttcgcagggatggaaggc
tcccgcccggtcctgctggaagtgcaggccctgctggcccccaatgcgggcggatcgccg
cgccgggctgtggtcggctgggacagtgcaagactgggcatgctgctggcggttctggaa
gcacgctgtggactgaaattggcccagaatgacgtttatctgaatatcgcaggggggttg
cgcatcactgaaccagccgccgatcttgccgttgccgccgccctgatctcggccgcaaca
gaacagcccgttgcagccaatgaagtcttttttggggaagtcggcctgtccggcgaaatc
agacaagtaccgcaaacggaagcacggctgaaagaagccgccaagcttggcttcgaagcg
gcctgccgaccgcgtcgggtagcacgcggcaagaatcgtccctccccgccagaagggctg
aagctggaggaaatcgggcatctgtctgatctggtcaggcgttttgttcctgaccagccc
tga
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