Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0487
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Entry
GbCGDNIH4_0487 CDS
T03156
Name
(GenBank) Transcriptional regulator, MerR family
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gbs03000
]
GbCGDNIH4_0487
Transcription factors [BR:
gbs03000
]
Prokaryotic type
Helix-turn-helix
XRE family
GbCGDNIH4_0487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_26
HTH_25
HVO_2718
Motif
Other DBs
NCBI-ProteinID:
AHJ64888
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Position
555267..556661
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AA seq
464 aa
AA seq
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MSRPLIGRTVRRLRQERGESQQSLAVRLGISASYLNLIEHDQRGVTASLLIKLAETLRVD
LRALSGQQERHLQTGLREVFADPMLANESVSVEEVEQLAAASPNAARAILTLYRSWRVAR
EDAGGIALPSGRRILLPNEEVRDLFAERQNYFAELEAAAGAICADLRTTPAEANHAIAER
LRARHGLTIRVGPSEGVHRRYDPSGSNLLLSEQLPRESRGFHMAFQLALMETREAVEGVI
TASRLSTPEAEGLLRIGLLNYTAAAILMPYEAFRHAALELRHDMDLLAARFCVSFEQACQ
RLASLQRPEARGVPFFFLRTDAAGNVSKRFSAAGFPFARFGGSCPRWVVHEAFTSPGAIR
VQVARLPDGATFLCFARCVRGVAERWGDPPPLHVVAMGCDIAHAPDIIYGDGIDIERAAV
GIGLSCRLCDRRDCRSRAFPPLEHRIAIDPNTTAESPYRFQEQH
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcctctgatcgggcgcaccgttcgccggttgcggcaggaacgtggggagtcc
cagcaatcgcttgcggtgaggctggggatttccgcaagctatctgaacttgatcgagcat
gaccagcgtggcgtgacggcatcgttgctgatcaaactggccgaaacgctgcgggttgat
ctgcgtgccctgtccggccagcaggagcggcatcttcagactggattgcgagaggttttc
gctgatccgatgctggcgaacgagagcgtatcggtggaggaggtggaacagcttgccgcc
gccagtcccaacgcagcccgggccattctcacgctgtatcggtcctggcgtgtcgcacgg
gaggatgcgggcgggatcgcattgccgtctggtcgccgtatcctgctaccgaatgaggag
gtacgcgatctgtttgccgagcggcagaattacttcgcagaactggaggcagccgccgga
gcgatctgtgccgatctgcgcaccaccccggcagaggccaatcatgccattgccgagcgg
ctgcgcgcccgccatgggctgaccatccgggtcggcccttcagaaggcgtacaccgtcgt
tacgatccttctggttccaacctgttgctgtcggaacaactgccgcgcgaaagccggggt
ttccacatggccttccagctggccctgatggaaaccagagaagcggtggagggggtgatc
acggcctcccgtctcagcacgccggaggctgaaggactgctgcgaatcgggctgctgaat
tataccgcggctgcgatcctgatgccttatgaagcgttccggcatgcggccctggaattg
cgacacgatatggatctgctggcggcacgcttttgcgtcagtttcgagcaggcctgtcag
cgcctggcctcgttacagcggccggaagcacgtggggtgcccttcttttttctgcggacg
gatgcggcggggaatgtgtcgaagcgtttttccgcagccggctttccattcgcgcgtttc
ggtggctcctgcccccgctgggtcgtgcatgaggcgttcacctcccccggggccatccgg
gtgcaggtggcacggctaccggatggtgcgacttttctgtgtttcgcgcgctgtgtgcgt
ggggtggcagagcgatggggagatccgccgccgctgcatgtggtggcaatgggctgcgac
atcgctcatgcaccggacattatctacggtgatggtatcgacatcgaacgggcagccgtg
ggaatcgggctgtcctgccgcctctgtgaccggcgggactgccgcagtcgcgccttcccg
ccgctcgaacaccgcattgcgattgaccccaacacaacggcagagagcccgtatcgcttt
caggagcaacattag
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