Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0527
Help
Entry
GbCGDNIH4_0527 CDS
T03156
Name
(GenBank) Efflux protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GbCGDNIH4_0527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbs02000
]
GbCGDNIH4_0527
Transporters [BR:
gbs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GbCGDNIH4_0527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_11
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AHJ64933
LinkDB
All DBs
Position
608904..610100
Genome browser
AA seq
398 aa
AA seq
DB search
MAGHKTGSSLPGRRMALAWAASLLTGAHNAWGREEGHSGIRHALPRTPSAPAAVAPDATA
SLLHRVVMGCSGEDYASAVQAVAGQRLGHLQTRLVVDVTDTLPRMESIRQARILARPASC
DVLLLDDIAMYTLSLIQPFRPATPQFLPALIGVEPDLRLPYAAPQMQSGLVIVRRGSLTK
DMVLLRYGDLASPRLHGRVGFSDAQYLQVMGAATLAMGGSMTYYAPGLTWLRRLRHHGAR
SYPSDEALGNALRTGEIVAALTLQANAVIWQQMVGDLAWHAAEEGVIPVIMQAAMLRDDA
DPAAAALACNMLLEPAVQTDLMHRTGFLPTVTSLLEDHETIRAYGFSTYQRDRFQWPAYS
YLAGEMMALWKQWIAIFDARPVRSAHRPAGHPKPVTRP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcataagaccggatcatctctgccggggcgtcggatggcgcttgcgtgggcg
gcatccctgttgacgggtgctcacaatgcatgggggcgggaggaagggcattccggtatt
cggcatgctcttccccggacaccttctgccccggctgctgttgcgcctgatgcgaccgcc
agcctgctgcaccgtgtggtcatgggatgcagcggtgaggattatgccagcgccgttcag
gcagtggcagggcagaggctggggcatcttcagacgaggctggtggtcgatgtcaccgat
acgttgccgaggatggaaagtattcggcaggcccgcattctggcacggccggcgtcttgc
gatgtgctgctgctggacgacatcgccatgtataccctgtccctgatccagccctttcgc
cccgccacaccgcaatttcttccggctctgatcggtgtcgaaccggatctgcgtctgccc
tatgctgctccgcagatgcagagcggtctggtcatcgtccgccgtgggtccctgacaaag
gacatggtgctgttgcgctatggtgatctggcttcaccgcggctgcatgggcgggtcgga
ttttcggatgcgcagtatcttcaggtcatgggcgctgccaccttggccatgggtgggagc
atgacatattacgcacccggtctgacctggctgcgccgcctgcgtcaccatggagcgcgg
agctatccgagcgatgaagcattgggcaatgccctccgtaccggagagatcgttgccgcc
ctgaccttgcaggccaatgcagtgatctggcagcagatggtaggcgacctggcctggcat
gcggcagaggagggggtcattcccgttatcatgcaggcagccatgctgcgcgatgatgcc
gatcctgccgctgccgccctggcctgtaatatgctgctggagccggcggtgcagaccgat
ctgatgcaccgtaccggttttctgccgaccgtaacctccctgctggaggatcacgaaacg
atccgggcttatggtttttccacctatcaacgggaccggttccagtggccggcttattcg
tatctggcaggggagatgatggcgctgtggaaacagtggattgccatttttgatgcccgg
cccgtgcgttcggcccaccgtccagcggggcatccgaaaccggtgaccagaccgtga
DBGET
integrated database retrieval system
