Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0869
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Entry
GbCGDNIH4_0869 CDS
T03156
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbs03400
]
GbCGDNIH4_0869
DNA repair and recombination proteins [BR:
gbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
GbCGDNIH4_0869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
ResIII
AAA_22
AAA_30
AAA_10
TrwB_AAD_bind
T2SSE
DUF5852
AAA_16
AAA
DUF478
AAA_19
CbiA
Zeta_toxin
AAA_7
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AHJ66743
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Position
1004060..1005799
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AA seq
579 aa
AA seq
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MTRRRCHPRIPTTGFLKRYGAGLMTETPILVGAGEHEARLLPAFANRHGLIAGATGTGKT
ITLQVLAESLSAAGVPVLCADVKGDLAGLSQPGAPNPKLEQRAARLGVHDYSYRAAPVVF
WDVFGVSGHKVRATVAEMGPILLSRMLELNDTQEGVLSIAFAVADDEGLLLLDYKDLRAV
LSHVAERAGELGTEYGNVSKATIGTIQRRLLRLEQEGGEAFFGEPALELADLLLITPDGR
GAVNILAADRLIHSPRLYATVLLWLLSTLYETLPEVGDLERPKLVFFFDEAHLLFDDAPK
ALVDKVTQVARLIRSKGVGVYFVTQNPLDIPASVLGQLGNRVQHALRAFTPADQKAVRAA
ADTFRQNPRLNTAEAIGSLAVGEALVSFLDESGSPSVVQKVQIVPPRSRIGAITAEERAE
IIRKSPVGTKYDASIDRISAYERLSGRATSGQQETAPVSPAPVEPGSDPWGTVMGAAPLP
PSSGQGSVWNSNGWQGGLADSAPYPPQEPVSRPAPREVRTQSRNEEGGGWLGDVLGSHGG
RQGLGEAFAKSVIRSLGSQVGTKVGGEVLRGILGSILKR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcgcaggtgtcatcctaggattccgacgaccggttttttaaaacggtacgga
gcaggactcatgacagaaacccccattctggtcggcgctggtgagcatgaagcacgtctg
ctgcccgcttttgccaaccggcatggcctgattgcaggggcgaccggcaccggcaagaca
atcactcttcaggtgctggcggaatccctgtccgctgccggggtgccggtcttgtgtgcg
gatgtgaaaggtgatctcgcggggttgtcgcagccgggcgcccccaatccgaaactggaa
caacgtgcggcgcggttgggcgttcatgattacagctatcgtgccgcgcctgtcgtattc
tgggacgtattcggggtttccggccacaaggtgcgggccacagtggcggagatggggccg
atcctgctttcacgcatgctggagttgaatgacacacaggaaggtgttctctccatcgcc
tttgcggtagcggatgatgaaggcctcctgctgcttgattacaaggatttgcgggctgtt
ctctcgcacgtggccgagcgggccggggagctgggcacagaatacggcaatgtcagcaag
gccacgatcggtacgatccagcgccgcctgctgagactggaacaggaaggcggagaagcc
tttttcggtgaaccggcgctggaactggctgatttactgctgatcacgccggatggacga
ggagcagtgaacatcctggcggcggatcggctgattcacagcccgcgcctgtatgcgact
gtgctgctttggctgctgtccactttatacgagaccttgccggaagtgggtgatctggag
cgccccaaactggtgtttttcttcgatgaggcacatctgctgtttgatgatgcccccaag
gcgctggtggacaaggtgacgcaggttgcgcgtctgatccgctccaagggggtcggagtt
tatttcgtgacacaaaatccgctggatattcccgcctctgtgctgggacagctcggtaat
cgtgtgcagcatgcgctgcgtgcttttacaccagcggaccagaaagcagtccgggcggcg
gcggacacattccgccagaatccgaggctgaataccgcggaggcgatcggatcgcttgca
gtcggtgaagcgctggtttctttccttgatgagagcggatcaccctctgtcgtgcagaag
gttcagatcgtgccgccccgctcccgtataggggcgattacggcggaggaacgggcagag
atcatccgcaaaagtccggtcggtacgaaatacgatgcatccattgaccggatcagcgct
tatgagcgtctttccgggcgcgcgacttccggccagcaagagaccgcccctgtttctcct
gcgccggtcgagccgggcagtgatccttggggtacggtgatgggagcggcacctttgccg
ccatcatccgggcagggatcagtctggaacagcaatggctggcagggtgggctggccgat
tcagccccttatcctccgcaagagccggtttcccgccccgccccgcgtgaagtccggacc
cagtcccggaacgaggaaggcggcgggtggctcggcgatgtgctcggcagccatggtggg
cgtcaggggctgggcgaggcgtttgccaaatctgtcatccgcagcctgggcagtcaggtc
ggtaccaaggttggtggggaagttctgcgtggtattctcggatccatcctgaaacgttga
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