Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0994
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Entry
GbCGDNIH4_0994 CDS
T03156
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GbCGDNIH4_0994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbs03400
]
GbCGDNIH4_0994
DNA repair and recombination proteins [BR:
gbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GbCGDNIH4_0994
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GbCGDNIH4_0994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AHJ66609
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Position
1135797..1136549
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AA seq
250 aa
AA seq
DB search
MEWTAPCIVLSAQPYGEADCLAAVFSEDQGLYRGLVRGGTSRQRGGIWQPGNLVMARWTA
RLADQLGSLTAELIHPAAALAMDDPLNLAVLRSLCTVAEGALPDREAHPAAFIPLPGLLT
RLSLGGGQVVEDAIRWEAILLRELGYGLDLQRCAVTGQVSGLHYVSPRTGRAVSSDAAEP
WLDRLLPLPAFLLHQAETDSDPVAWRDGLRLTGYFLSRDVFGTRHRPLPPARMSLYDRIA
ALTETEREHA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggaatggacggcgccctgtatcgtgttgagtgcccagccttacggtgaggcagactgt
ttggctgcggttttttccgaggatcaaggactgtatagaggactggtccgtggtggtaca
tcgcggcagcgcggcggtatctggcagccgggcaacctcgttatggcacgttggacggcg
aggttggccgatcagcttggctccctgacggcggagttgatccatccggctgctgcgctg
gccatggatgatccccttaatctggccgtgctgcggtccctttgcaccgttgcggaaggc
gcattgccagaccgggaggcacatcccgccgcttttatacccttgcccggtctgctgaca
cgcctctcgcttggcggggggcaggtggttgaggatgccatacgatgggaagcaatcttg
ctgcgggagcttggctacggcctcgatcttcagcgttgtgctgtaacggggcaagtgagc
ggtctgcattacgtctcgccgcgtactggccgcgctgtctcatcagacgcggcagagcca
tggctggaccggcttttgccgctaccggctttcctgttgcatcaggcggaaaccgacagt
gatccggtcgcctggagggacggattacggctcaccggttattttttatcgcgggatgtg
ttcggaacccggcatcgccctcttcccccggcgcgcatgtcgctatacgaccgtatcgcg
gcactgacggaaacggaacgtgaacatgcctga
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