Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_1008
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Entry
GbCGDNIH4_1008 CDS
T03156
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs00260
Glycine, serine and threonine metabolism
gbs00460
Cyanoamino acid metabolism
gbs00630
Glyoxylate and dicarboxylate metabolism
gbs00670
One carbon pool by folate
gbs00680
Methane metabolism
gbs01100
Metabolic pathways
gbs01110
Biosynthesis of secondary metabolites
gbs01120
Microbial metabolism in diverse environments
gbs01200
Carbon metabolism
gbs01230
Biosynthesis of amino acids
gbs01240
Biosynthesis of cofactors
gbs04981
Folate transport and metabolism
Module
gbs_M00140
C1-unit interconversion, prokaryotes
gbs_M00346
Formaldehyde assimilation, serine pathway
gbs_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GbCGDNIH4_1008
09102 Energy metabolism
00680 Methane metabolism
GbCGDNIH4_1008
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GbCGDNIH4_1008
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GbCGDNIH4_1008
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GbCGDNIH4_1008
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GbCGDNIH4_1008
Enzymes [BR:
gbs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GbCGDNIH4_1008
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHJ66593
LinkDB
All DBs
Position
complement(1150346..1151650)
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AA seq
434 aa
AA seq
DB search
MNTMSASALDAFFGARLADTDPDLFAALEKEFHRQEDGIELIASENIVSAAVLEAQGSVL
TNKYAEGYPGKRYYGGCAAVDIAEQLAIDRAKQLFGCEFANVQPHSGAQANGAVFFALAK
PGDTILGMSLAAGGHLTHGAAPTVSGKWFNAVQYGVRKEDGLLDYEELEALAREHKPKII
IAGGSAYPRFIDFPRIRKVADEVGAYFMVDMAHFAGLVAAGIYPSPLPHAHVVTTTTHKT
LRGPRGGMILTNDLELGKKFNTAVFPGLQGGPLMHVIAAKAVAFGEALKPDFKTYQQSVA
NNAKVLASTLVERGLAIVSGGTDTHLMLVDLRPKNVTGKATDESLGRAHITTNKNAIPFD
PQKPAVTSGIRLGTPAGTSRGFGEAEFREIGLMIDRVVEGLSKAGENGSNEAVEQEVGAE
VKALCKRFPLYRNH
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaatgtccgcatccgcccttgatgcctttttcggcgcacgcctcgccgatact
gatcccgacctgttcgcggcccttgaaaaagaatttcaccgtcaggaagacggtatcgaa
ctgatcgccagcgaaaacatcgtttctgcggcggttctggaagctcagggttccgtcctg
accaataaatatgccgagggttatcccggcaagcgctactacggtggttgcgcggcggtc
gacatcgccgagcagctcgccattgaccgcgccaagcagctgttcggctgcgaattcgcc
aacgtgcagccgcattccggcgcacaggccaatggcgcggtgttcttcgcgctggccaag
ccgggcgacaccattctgggcatgagcctcgccgctggcggccatttgacccatggtgcg
gcccccactgtcagcggcaagtggttcaacgcagtgcagtacggcgtccggaaggaagac
ggcctgctggattatgaggagctagaagccctcgcccgtgagcacaagccgaagatcatc
atcgccggtggttccgcctatccgcgcttcatcgacttcccccgcatccggaaggtcgca
gatgaagtcggcgcgtatttcatggtcgacatggcgcattttgccggtctggtcgcagcc
ggcatctatccgtccccgctgccgcatgcgcatgtggtcaccaccaccacccataagacc
ctgcgtggcccgcgtggcggcatgatcctcaccaatgaccttgagctgggcaagaaattc
aacaccgccgtgttccccggtctgcaaggtggcccgctgatgcatgtcatcgctgccaag
gccgttgccttcggggaagccctgaagccggacttcaagacctatcagcaatccgttgcc
aacaatgcgaaggttctggcttccacgctggtggaacgcggtttggccatcgtgtccggc
ggcaccgacacccatctgatgctggtcgatctgcgtccgaagaatgtgaccggcaaagcc
actgatgagagcctcggccgcgcccatatcaccaccaacaagaacgccattccgttcgac
ccgcagaagcccgccgtgacctccggcattcgtctcggcacgccggccggcacgtcccgc
ggctttggcgaggctgaattccgcgagatcgggctgatgatcgaccgcgtggtggaaggc
ttgtcaaaggctggcgaaaacggctccaacgaagccgtcgagcaggaagtcggcgccgag
gtcaaggcgctctgcaagcgtttcccgctctatcgcaatcactga
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