Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_1219
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Entry
GbCGDNIH4_1219 CDS
T03156
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbs03032
]
GbCGDNIH4_1219
03400 DNA repair and recombination proteins [BR:
gbs03400
]
GbCGDNIH4_1219
Enzymes [BR:
gbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GbCGDNIH4_1219
DNA replication proteins [BR:
gbs03032
]
Prokaryotic type
DNA Topoisomerases
GbCGDNIH4_1219
DNA repair and recombination proteins [BR:
gbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GbCGDNIH4_1219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHJ66406
LinkDB
All DBs
Position
complement(1322570..1325392)
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AA seq
940 aa
AA seq
DB search
MSDHTNPPSAPPDDDPNGGSLLMPVTLEEEMSRSYLDYAMSVIVSRALPDARDGLKPVHR
RILYGMQESGYTADKPYRKSARINGDVMGKYHPHGDAAIYDALVRLAQPFSLRVPLIDGQ
GNFGSMDGDPAAAPRYTEARLARSASFLLNDIDRDTVDFQPNYDDSEMEPRVLPASYPNL
LVNGADGIAVGMATKIPTHNPTEVIDATLAMIDNPDITLDELMTVIPGPDFPTGGLILGR
SGIRSAFETGKGSITVRARTDFEEVRGGRQAIVISEIPYQVNKATLQERMAELVRAKQIE
GISDIRDESDRSGVRVVIELKRDATPDVVLNHLFRFTQLQISYGINMLALDGGQPRLMGL
RDVLSTFIRFREDVILRRARFELNKARDRAHLLVGLAIAVANIDEVIRLIRQSPDSTSAR
IALMERDWPAADVAPLLTLIDDGGNVLTEAQTVRLTEVQARGILELRLQRLTGLERDKIH
NEMQEVAARIGELLEIIGSHIRRMEVMREELAVIRAELNSPRRSEINDSLADQDDESLIE
PGQMVVTITRDGFIKRTPLDVFRQQHRGGRGRAAASMRGDDIVTRSFNAHTHQWVLFFSS
GGKAYRQKVWRLPEAGPTAKGRALVNLLPELGSDGITAVLPLPQDESLWEGLHLVFATAS
GGIRRNRLSDFKNVRASGLIAMKLDEGDRLIGVATCREGDDIMLASRLGRCIRFQANEDT
LRVFAGRESSGVRGMKLAQGDEVISLSVLRHVEATPEERAAYLRYASARRRSAAGEEDQI
DAEVMEADDSEVTADDTALSPERIAGLEEAEEFLLTVTIAGFGKRSSAYDYRVSGRGGQG
IANINLAPRNGRAVAATFPVRPGDDVMLVTDAGRLIRVPADQVRITGRSTMGVTLFRVDK
DEVVTSVFPVLETESVDDNGDDADSVAPAAPDGQVTDSDD
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgatcataccaatcccccgtctgcaccgccggatgacgatccgaacggcggctcc
ctgctgatgccggtcacgcttgaggaggagatgagccgctcctacctcgattacgcaatg
tccgtcattgtcagccgtgcgctgcccgatgcgcgggatggtctgaagccggtgcatcgg
cgcatcctctacgggatgcaggaaagcggctatacggcggataaaccctatcgcaaatcc
gcccgcatcaatggtgacgtgatgggtaaataccatccgcacggtgatgccgcgatttat
gatgcgctggtgcgattggctcagcctttctccctgcgggtgcccctgattgatggtcag
ggcaatttcggttccatggacggcgatccggctgctgcgccgcgttataccgaggcgcgt
ctggcccgctccgccagcttcctgctgaacgatattgaccgcgatacagtcgattttcag
ccgaactatgacgatagcgagatggaaccccgcgttctgcccgcttcctatcccaatctt
ctggtcaacggggcggatggcatcgcggtcggcatggcgaccaagatccctactcacaac
ccgactgaagtcatcgacgccactctggcaatgatcgacaatccggacatcactcttgat
gaattgatgaccgtgattcccggtccggattttccgacaggcggcctgattctcgggcgt
tccggcatccgctcggcttttgagaccgggaaaggcagtatcaccgttcgcgcccgcact
gatttcgaggaagtgcgcggcggccgtcaggccatcgtgatctccgaaattccctatcag
gtgaacaaggccaccctgcaggagcgcatggccgagctggtgcgtgccaagcagattgag
ggcatcagcgatatccgtgacgaaagtgatcgctccggcgtgcgtgtggtgatcgaattg
aagcgcgatgccacgccggatgtggtgctgaaccatctgttccgctttacccagctgcag
atcagctatggcatcaatatgttggccctggatggcgggcaaccgcgcctgatggggctg
cgggatgtgctgtctacattcattcgtttccgcgaggatgtcatccttcgccgggcgagg
tttgagctgaacaaggcacgtgatcgcgcgcatctgctggtcggtctggcgattgctgtg
gccaatatcgacgaggtgatccgcctgattcgtcagagtccggacagcaccagcgcccgt
atcgccttgatggaacgcgattggccggccgccgatgtggcaccgctgctcacgctgatc
gatgatggcggcaatgtgctgaccgaagcgcagacagtgcgactgacggaagtgcaggcc
cgcggcattctggaactgcgtctgcaacgcctgaccgggcttgagcgtgacaagatccac
aatgagatgcaggaagtcgccgcccgtattggcgagcttctggaaattatcggcagccat
atccgccgcatggaagtcatgcgggaagaactggcggtgatccgggccgagctgaactct
ccgcgtcgcagcgaaatcaatgacagccttgccgatcaggatgatgaaagtctgatcgaa
ccgggtcagatggtggtgaccatcacccgtgacggtttcatcaagcgtacgccgctggat
gtgttccgtcagcagcatcgcggtggacggggccgtgcggctgccagcatgcgtggcgat
gatatcgtgacccgcagctttaacgcacacactcatcaatgggtgctgttcttctcctcc
ggcggcaaggcgtatcgccagaaagtctggcgcctgcccgaagccggcccgacagccaag
ggcagggcgctggtcaatctgctgccggaactgggcagtgacgggattaccgccgtgctt
ccgctgccgcaggatgagtcgctgtgggaagggctgcatctggtgttcgccactgcttcc
ggtggtatccggcgcaatcggctctccgacttcaaaaatgtgcgggcctccggtcttatt
gcaatgaagctggatgaaggtgaccgtctgatcggcgtcgctacctgtcgggagggggat
gacattatgctggcctcccgcctcggccgctgcatccgtttccaggcgaatgaggacacg
ctgcgcgtttttgccgggcgcgaaagctccggtgtccgcggcatgaaactggcgcaggga
gacgaggtcatcagcctgtccgtgctgcggcatgtggaggcaacgccggaagagcgagca
gcctatctgcgctatgcctccgcccgccgtcgcagtgctgctggagaagaggatcagatc
gatgccgaggtcatggaggcggatgattccgaggtcacggccgatgatacagccctttcg
ccggagcggatcgccgggctggaagaagccgaagaattcctgctcaccgtcaccattgcc
ggtttcggcaagcgatcttccgcctatgattatcgtgtgtctggccgtggtgggcagggg
attgccaatatcaatctcgctccccgcaatggtcgggccgtggcggcaactttcccggtc
aggccgggtgatgatgtaatgctggtcactgacgcgggtcgtttgattcgtgttcccgcc
gatcaggtgcggattaccggacgctctaccatgggcgttaccctgtttcgggtcgataag
gatgaggtcgtcaccagcgttttcccggtgctggagacagagtctgtcgatgataatggg
gatgatgccgattcagttgctccggcagcacctgatggacaggtgacggattcagatgac
tga
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