Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_1304
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Entry
GbCGDNIH4_1304 CDS
T03156
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbs03032
]
GbCGDNIH4_1304
03036 Chromosome and associated proteins [BR:
gbs03036
]
GbCGDNIH4_1304
03400 DNA repair and recombination proteins [BR:
gbs03400
]
GbCGDNIH4_1304
DNA replication proteins [BR:
gbs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GbCGDNIH4_1304
Chromosome and associated proteins [BR:
gbs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GbCGDNIH4_1304
DNA repair and recombination proteins [BR:
gbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GbCGDNIH4_1304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
AHJ66257
LinkDB
All DBs
Position
complement(1465030..1465323)
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AA seq
97 aa
AA seq
DB search
MNKMELITAVADELELPRSRAAQAVDAVLGSIESALKRHEEVRLVGFGSFAVASRKASVG
RNPRTGEEIAIPPALSVRFKAGKTLKDALNEQDSSAE
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaaatggaattgatcacggcagttgccgatgagcttgagcttccgcgtagccgg
gccgcacaggcagtcgacgcggttctgggcagcatcgagtctgctttgaaacgtcacgag
gaagtccggctggtggggtttggctcgtttgccgtagcctcccgcaaggcatctgtcggg
cggaatccgcgcaccggggaagaaatagcgattccgcccgccttgtcggtacgtttcaag
gctggaaaaacactgaaagatgcgctgaacgagcaggattcttcagcggaataa
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