Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_1530
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Entry
GbCGDNIH4_1530 CDS
T03156
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GbCGDNIH4_1530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbs03400
]
GbCGDNIH4_1530
Enzymes [BR:
gbs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GbCGDNIH4_1530
DNA repair and recombination proteins [BR:
gbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GbCGDNIH4_1530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
VasI
Motif
Other DBs
NCBI-ProteinID:
AHJ66010
LinkDB
All DBs
Position
complement(1739349..1740815)
Genome browser
AA seq
488 aa
AA seq
DB search
MTYTVHLPDTACFTAWRQAAQLAISHTIPPEDIDWSGVETLFGLTHLPKERGPRRVAVPP
AFLSLAETVIWHRAQDRGGLLYQALWRISRGDLAALSPSDGLGRTLTLMASAVKRDIHKM
HAFVRFREIAGEHTRRRFVAWFEPEHHTLEPASPFFVQRFADMDWMIATPDLSAHFTEGA
LRFGAGMPRPNLPEDASAALWDTYFANIFNPARIKLSAMRSEMPKKYWRNLPETRLIPDM
LADAEARVQRMHQAGTTAPRPGAAAISARYRASMPVATEAPPETLDEAGQAARQCRRCSL
CEAATRTVWGEGDAGASLMIVGEQPGDREDLEGRPFVGPAGQVLRDLMGKVGMAEEEVWL
TNAVKHFKFLPRGRHRLHQSPDRKEIEACRWWLDLELSLVRPRLTLALGASAAFALTGNR
AAMTRRRGMVEEGLHGGPVLISWHPSFILRLPNPQESEKARLELEQDLRTAWQMREAGDI
TSSAGGAL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgacctacacggttcacctgcctgatacggcgtgtttcactgcatggcgacaagcggcg
cagcttgccatcagccatactataccgccggaagatatcgactggtcaggagtggaaacc
ctgttcggccttacccacttgccgaaggagagggggccgcgccgtgttgctgtaccgccc
gccttcctcagcctcgcggaaacggtgatctggcaccgggcgcaggatcgcggcggattg
ctgtatcaggctttatggaggatcagccgtggtgatctcgcggccttgtccccgagtgac
gggctgggacgtacgctgacgctgatggcatcggcggtcaagcgtgacattcacaaaatg
cacgcttttgtgcgtttccgggagatcgcgggagagcacacaagacgccgcttcgtggcg
tggttcgagccggaacatcatacccttgagcctgccagcccgtttttcgtccagcgtttt
gcggatatggattggatgatcgccacccctgatctctcggcgcattttacggaaggagcg
ttgcggtttggcgccggcatgcctcgcccgaatctgccggaggatgcatcggcggctttg
tgggacacgtatttcgccaatatctttaatccagcgcgcatcaaattgtctgcgatgagg
tcggagatgccgaagaaatactggcgcaacctgccggagacgaggctgatcccggatatg
ctggccgatgcggaggcgcgggtgcagcgcatgcatcaggcggggacgacagcgccacgt
cccggtgccgccgcgatttcggcccgttaccgcgcctccatgccggtcgccacggaggcg
ccgcctgagactctggatgaggcggggcaggcggcccggcaatgccgtcgttgctccttg
tgcgaggcggcgacccggacggtctggggcgagggcgatgccggtgcttcattgatgatc
gtgggagagcagccaggcgaccgggaggatctggagggacggcctttcgtcggtccggcc
gggcaggtgttgcgtgacctgatgggcaaggtcggcatggcggaggaggaagtctggctg
accaatgcggtcaagcacttcaaattcctcccccgtggtcggcaccgtctgcatcaaagc
ccggaccgaaaagagatagaggcatgccgctggtggctcgatctggagctatcgctggtc
cgcccgcgtttgacgctggccctgggcgcctcggcggcttttgcattaaccggcaaccgg
gctgccatgacaaggcgacgaggcatggtggaggaggggcttcacggcggccccgtcctg
atctcttggcatccatccttcattttgcgcttgcccaacccgcaggagagcgaaaaggcc
aggctggaactggagcaggatctccggaccgcgtggcagatgagggaggccggggatata
acctcttcagccgggggggcattgtaa
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