Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_1628
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Entry
GbCGDNIH4_1628 CDS
T03156
Name
(GenBank) Transporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GbCGDNIH4_1628
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbs02000
]
GbCGDNIH4_1628
Enzymes [BR:
gbs01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
GbCGDNIH4_1628
Transporters [BR:
gbs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GbCGDNIH4_1628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_29
AAA_21
RsgA_GTPase
DEAD
ABC_ATPase
DUF6391
APS_kinase
SbcC_Walker_B
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHJ65899
LinkDB
All DBs
Position
complement(1875833..1877701)
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AA seq
622 aa
AA seq
DB search
MQTAPRPDTPGCMDARPLDQVTDQSPPPHAPPKRRGKGARKINVELEPTALAMMGRLWRE
HIAHHRVRMLVVILLTALMAGSTALYPVVIQHAIDLFNARDRRILYQIPVLVLIVTAIKG
AAMYGQTVSMQQLVLIVIRELQERMFSHLAHADLDRVEREAPAQLAARFTTDAATIREAL
VRAVNGVGDVVTVVGLVSSMVYLDWVLSLIAAAMYPLAALPIQKIGKRIRRASGGMQERM
GETAALLNESFAQARTIRAYRLEDFEIRRAGEAFQHLYSALLRMTRSRARVDPVLEVLGG
SAVAVVIGFTGWRAANGQSSLGDFAGFIAALLIASRPLRALGSLNAAVQEGVAGLVRVFA
VIDEPAAIRDAPGAVPLPQGQGHVAFENVGFVYADGRTGLDGLSFAAQPGMTVALVGPSG
AGKSTALALLPRLRDATSGRVLVDGADVREVTLASLRDAIAYVGQDALLFDDTIAANIGI
GREGAERAEIEQAAEAAAGGFIRDLPEGFETIVGPGGQRLSGGQRQRVVLARALLRNPRI
LLLDEATSALDAESEAAVQQALTRLRQGRTTLVIAHRLSTVRDADLVVAMADGRVAEQGT
HTALMEQDGLYARLVRSQTLEL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaccgccccccggcctgatacacccgggtgcatggatgcacgcccgctcgatcag
gtaacggatcagtcgccacccccacacgctccgccaaagcggagaggtaaaggggcgcgg
aagatcaacgtggagttggagccgaccgccctcgccatgatggggcggctgtggcgggag
catatcgcgcatcaccgtgttcgtatgctggtggtgatcctgctgacggcgctgatggcg
ggcagcacggcgctgtatccggtggtgatccagcatgcgatcgatctgttcaatgcccgt
gaccggcggattttgtaccagattccggtgctggtgctgatcgtcaccgccatcaagggc
gcggcgatgtatggacagactgtctccatgcagcaactggtactgatcgtcatcagggag
ttgcaggagcgcatgttcagccacctcgcccatgccgatctggatcgggtggagcgggag
gctccggcgcagcttgccgcgcgtttcaccaccgatgccgccaccatccgggaggcgctg
gtccgtgccgtcaacggggtgggcgatgtggtgacggtggtgggactggtctcctccatg
gtgtatctggactgggtgctgagcctgattgccgcggcgatgtatccgctggcggcgctg
ccgatccagaaaatcggcaagcgcatccgccgtgcctccggcggcatgcaggagcgaatg
ggggaaaccgcggctctgctgaacgagagtttcgcgcaggcccgcaccatccgcgcctac
cggctggaggatttcgagatcaggcgcgccggagaggcttttcagcatctctatagtgcg
ttgttgcgtatgacgcggtcccgcgcgcgggttgatccggtgctggaggtgctgggcggc
agcgctgtcgcggtggtgatcggcttcaccggctggcgcgccgcaaacggacagagcagc
ctgggcgattttgccggttttatcgccgcactgctgatcgcctcccgcccgctgcgtgcg
ctcggctcgctgaacgcggcagtgcaggagggggtggccgggctggtccgggtgtttgcc
gttatcgacgagcctgccgctatcagggacgcacccggtgcggttcctctgccgcaaggg
caagggcatgtggcgttcgagaatgtgggcttcgtctatgccgatggccgtaccgggctg
gacgggctgagcttcgctgctcagccgggcatgacggtggcgctggtcgggccttcggga
gccggaaaatccaccgcgctggccctgttgccgcgcttgcgggatgcgacgtccggccgg
gtgctggttgatggcgcggatgtcagggaggtcacgcttgcctctctgcgggatgccatt
gcctatgtgggacaggatgcattgctgttcgacgacaccatcgccgccaatatcggcatc
gggcgtgagggcgcggagcgggcggagatcgagcaggccgccgaagccgctgccgggggc
ttcatccgcgatctgccggaagggttcgagacgatagtcggccccggcggccagcgcctg
tcaggcgggcagaggcaacgtgtggtgctggcgcgcgcactgttgcgcaatccccgcatt
ctgctgctcgatgaagcgaccagcgcgctggatgcggaaagcgaggccgctgtacagcag
gctctgaccagattgcgtcagggccgcaccacgctggtgatcgcgcaccgtctgtccacc
gtgcgcgatgccgatctggtggtggccatggccgatggacgggtggcggagcagggcacc
catacggccctgatggagcaggacgggctgtacgcccggctggtgcgcagccagacgctg
gagctttaa
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