Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_1905
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Entry
GbCGDNIH4_1905 CDS
T03156
Name
(GenBank) PDZ domain family protein
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs01503
Cationic antimicrobial peptide (CAMP) resistance
gbs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GbCGDNIH4_1905
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
GbCGDNIH4_1905
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gbs01002
]
GbCGDNIH4_1905
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gbs03110
]
GbCGDNIH4_1905
Enzymes [BR:
gbs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
GbCGDNIH4_1905
Peptidases and inhibitors [BR:
gbs01002
]
Serine peptidases
Family S1: chymotrypsin family
GbCGDNIH4_1905
Chaperones and folding catalysts [BR:
gbs03110
]
Other chaperones and cochaperones
DegP / HtrA
GbCGDNIH4_1905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ_2
PDZ_6
PDZ
Trypsin_2
GAP1-C
Pept_S41_N_bact
Motif
Other DBs
NCBI-ProteinID:
AHJ65634
LinkDB
All DBs
Position
2159980..2161026
Genome browser
AA seq
348 aa
AA seq
DB search
MPLATATVAQADRRSKRQAMSEDRWQIPQNMQPHPSDYSFDLEAVLQGIVFLRCLGPDGF
DPDGSDDQGAQRTGSGVAIEVGSSQTKMVITMTYLVNDADAIWITTQDGQVTPGHIIALD
HESGFALIRPADALACPAIQIGDSSSVASESGAILAASGGITHAMETRIIARQEFAGYWE
YHIPDALLVTPPHPVWGGCALIGTDGRLLGIAAVVLQQGDVGAGQLDINLIIPVSHLQAI
LPELLTHGRRLASRPWLGLLAAEQEAGILISDVVPHGPAEAAGLRQGDQIIAINGKEPGD
LATLWRLLWQSGAPPVGVAITILRDGQTMHTQVQAIDRYLYDKTPRMH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgccgctggctacagcgacagtggcgcaggcggatcgaaggagcaaacggcaggcaatg
tcggaagaccggtggcaaataccgcagaacatgcagcctcatccttcggattacagcttc
gatctggaggctgtcctgcaaggcattgtcttcctgcgttgtcttggcccggacgggttt
gatcccgatggcagcgacgatcagggcgcacagcggaccgggagcggtgtcgcgatcgag
gtcggttccagccagacaaaaatggtcatcaccatgacctatctggtgaacgacgccgat
gcgatctggatcacgacacaggacggtcaagtcacgccgggtcatatcatcgcgctggat
catgaaagcggctttgcgctgatccgtccggctgacgccttggcctgccccgccatccag
atcggcgattcctccagcgtcgccagcgaaagcggcgcgattctggcagcctccggcggc
atcacccatgcgatggaaacgcggatcattgcccgtcaggaatttgccggatactgggaa
taccatatccccgatgcgctgctggtgaccccaccgcatcccgtctggggtggctgcgcc
ctgatcggcacggacggtcgcctgcttggaattgctgccgtggtgttgcagcagggcgat
gtcggtgcaggacagctcgacatcaacctgatcattccggtctctcacctgcaggccatt
ctgccagagctgctgacccatggcagaaggctggccagtcggccatggctgggcctgctg
gccgctgaacaggaagcgggaatcctcatcagcgacgttgttccacacggcccggcagaa
gccgccggtctgcggcagggcgaccagatcatcgccatcaatggcaaggagccgggtgat
ctggcgacgctgtggcggctgctatggcaaagcggtgcgccccccgtgggggttgccatc
accatcctgcgggatggccagaccatgcatacgcaggttcaggccattgaccgctatctg
tatgacaaaaccccccggatgcattga
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