KEGG   Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_1944
Entry
GbCGDNIH4_1944    CDS       T03156                                 
Name
(GenBank) Selenocysteine lyase
  KO
K04487  cysteine desulfurase [EC:2.8.1.7]
Organism
gbs  Granulibacter bethesdensis CGDNIH4
Pathway
gbs00730  Thiamine metabolism
gbs01100  Metabolic pathways
gbs01240  Biosynthesis of cofactors
gbs04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:gbs00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    GbCGDNIH4_1944
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    GbCGDNIH4_1944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gbs03016]
    GbCGDNIH4_1944
   03029 Mitochondrial biogenesis [BR:gbs03029]
    GbCGDNIH4_1944
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gbs02048]
    GbCGDNIH4_1944
Enzymes [BR:gbs01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     GbCGDNIH4_1944
Transfer RNA biogenesis [BR:gbs03016]
 Eukaryotic type
  tRNA modification factors
   Thiolation factors
    GbCGDNIH4_1944
 Prokaryotic type
    GbCGDNIH4_1944
Mitochondrial biogenesis [BR:gbs03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    GbCGDNIH4_1944
Prokaryotic defense system [BR:gbs02048]
 DNA phosphothiolation system
  Sulfur modification proteins
   GbCGDNIH4_1944
SSDB
Motif
Pfam: Aminotran_5 Beta_elim_lyase Pyridoxal_deC Aminotran_1_2 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: AHJ65593
LinkDB
Position
complement(2201318..2202568)
AA seq 416 aa
MWPARPVRRPDGLFAVPADLKRKSRFVAPLSVYLDANASEPVRPEAMAALQEVVLEPGNP
SSLHRAGRRARDRQETARETLAMLYGAGADEVIFTSGGTEADSLAVHVLGEGRRLLLGAT
EHPALLSCRPDAELIGVDREGVTDLHDLEARLVQGGQALVCLMLANNETGVIQPVAEVAA
LCRRYGALLHVDAAQAAGRMAVSMRTLDADSMALSAHKLGGVPGVGALLLRDAAHRDVRP
LMKGGGQERGWRGGTPALPAISAFAAAARAAMRTDEQGGAWGRLIEWRDRLEQAATMAGA
VVAGGGAKLGRLPNTSCLILPGVAAQRQVMALDLAGIQVSAGSACSSGKVARSHVLAAMG
FGQQAGEAIRVSLPWNVTEADVQAFMDAYATMASRLRPEPSSKPFPSSVSHPISAR
NT seq 1251 nt   +upstreamnt  +downstreamnt
ttgtggcctgcccgtcctgtaaggcggcctgatggcttatttgcagttccggcagacctc
aaaaggaaatcgagattcgtggcacccctatccgtttatctggatgcgaatgcttccgag
ccggtccgcccggaggccatggcggccttgcaggaggtcgttctggaaccgggtaatcca
tcctctctgcatcgcgccgggcggcgggcgagggatcggcaggaaacggcccgtgaaacc
ctggcgatgctctatggcgccggggctgatgaggtgattttcacctccggcggtacggag
gcagacagtcttgccgtgcatgtactgggggaggggcgccgtttgcttcttggggcgaca
gagcatcccgctttgctgtcttgccgcccggatgcggagctgattggtgttgatcgcgaa
ggtgtgaccgatctgcatgatctggaagcacggctggtgcagggtggccaggctctggtg
tgcctgatgctggccaataatgagacgggtgttatccagccggtggcggaggttgccgcg
ctttgccgccggtacggagcccttctgcatgtcgatgcggcgcaggcggctggccggatg
gcggtgtcgatgaggacactggatgcggacagtatggctttgtctgcgcataagctggga
ggtgttccgggggtgggggcgctgctgctgcgtgatgcggcgcatcgggatgtcaggccg
ctgatgaaaggtggtggtcaggagagaggctggcgcggtggcactccggccttaccggcg
atcagcgccttcgccgccgcggcccgtgcagccatgcggacagatgagcaaggaggagcg
tggggccggctgattgaatggagagacaggctggaacaggcagccaccatggcaggggcg
gtggtagcaggtgggggggcgaagctggggcgtttgcccaacacgtcatgtctgatcctg
cccggtgtggcggcgcagcgtcaggtgatggcgcttgatctggccggtattcaggtttca
gccggatcggcatgcagttccggcaaggtagcgcgcagccatgtgctggcggcgatgggg
tttggacagcaggcgggggaggcaatccgtgtctcgttgccatggaatgtgacggaggcg
gatgtgcaagcctttatggatgcctatgccaccatggcctcccggttgaggccagaaccg
tcttccaagccctttccttcctctgtgtctcatcccatatcggcccggtga

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