Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_2142
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Entry
GbCGDNIH4_2142 CDS
T03156
Name
(GenBank) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs03030
DNA replication
gbs03430
Mismatch repair
gbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GbCGDNIH4_2142
03430 Mismatch repair
GbCGDNIH4_2142
03440 Homologous recombination
GbCGDNIH4_2142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbs03032
]
GbCGDNIH4_2142
03400 DNA repair and recombination proteins [BR:
gbs03400
]
GbCGDNIH4_2142
Enzymes [BR:
gbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GbCGDNIH4_2142
DNA replication proteins [BR:
gbs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GbCGDNIH4_2142
DNA repair and recombination proteins [BR:
gbs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GbCGDNIH4_2142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHJ65376
LinkDB
All DBs
Position
complement(2410276..2410953)
Genome browser
AA seq
225 aa
AA seq
DB search
MSRSVLFDTETTGFDPLTGDRILEIAALELFNDLPTGNTFHTLVDPCRDVPEEATRVHGF
TAEMLRGKPLFADIVEDLLAFFGHDPLIAHNAPFDFNFLNAEFARLGKPKLDPARMIDTL
VMAKARFPGMPNSLDALCRRFSIDLSQRTTHNALLDCKLLAEVYIELTGGRQRGLGLTEA
ERAAAVAEYEHSASRVPRPIMPDEATLAAHEAFIDRLKDPVWRME
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgttctgttcgatacggagacgaccgggttcgaccctctcaccggggat
cgcatcctggaaatcgccgcgctggaactattcaatgatctgccgaccggtaacactttc
cataccctggtcgatccgtgccgtgacgtgccggaggaagcgacgcgggtgcatggcttt
acggcggagatgctgcggggaaagcctctgttcgctgatattgtggaggatctgctggct
tttttcggccatgatccgttgattgcgcataatgcaccgttcgacttcaactttctgaac
gccgaatttgcgcggttggggaagccgaagctcgatcctgcccggatgattgatacgctg
gtgatggcaaaagcccgttttccgggcatgccgaacagtctggatgcgctctgccgtcgc
ttcagcatcgatctgtcccagcgcaccacccataacgcgttgctcgactgcaagctgctg
gctgaggtctacatagaactgaccggaggccgtcagcgcgggctggggctgacggaggcc
gagcgtgcggccgctgtggcggaatatgaacattccgccagccgtgtgccgcgtccgatt
atgccggatgaggcaacgctggcggcccatgaagcctttatcgaccggctgaaagacccg
gtctggcggatggagtaa
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