Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_2172
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Entry
GbCGDNIH4_2172 CDS
T03156
Name
(GenBank) Isoamylase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs00500
Starch and sucrose metabolism
gbs01100
Metabolic pathways
gbs01110
Biosynthesis of secondary metabolites
Module
gbs_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
GbCGDNIH4_2172
Enzymes [BR:
gbs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
GbCGDNIH4_2172
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
AHJ65344
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All DBs
Position
complement(2441897..2443996)
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AA seq
699 aa
AA seq
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MRTRISEGLPYPLGATWDGLGVNFALFSANATKVELCLFDSSGMRELQRIELPEYTDEVW
HGYLPDARPGQVYAYRVHGPYAPEVGHRFNPHKLLLDPYAKAMVGDLHWDDACHGYIIGD
EKEDLSFDTRDSARFMPKCRVIDSAFTWGRDHPPSVPWEKTVFYETHLRGYTMRHPMVPE
PLRGTFAGMSVKEVVKHIRSLGVTSIEFLPVHYFINDRFLIEQNLSNYWGYNTISFFAPH
PRYSATGAVAEFKEMVAHLHDAGLEVILDVVYNHTAEGNERGPTLSFRGIDNASYYRLAP
DPRYYINDTGTGNTLNLSHPRVLQMVTDSLRYWVEEMHVDGFRFDLATILAREAYGFDEG
GGFLDSCRQDPVLSRVKLVAEPWDLGPGGYQVGGFPPGWAEWNDRFRDTVRGFWKGEETA
SAMAARLCASADIYNRRGRKPWASVNFVTAHDGFTMQDVVTYNDKHNEANGEDNKDGHSH
NRSWNCGVEGPSDDPALCALRERQKRNLMATLFLAKGTPMLLAGDEFGRTQQGNNNAYCQ
DNEISWVDWDIDADGHTLIAFVRTLISLRERFPILRRGRFLTGAYDEELGVQDVTWIAAS
GDTMEPADWENGTRCFGMLMDGRAQASGVRRAGTDTTLLVIYNAHHEEVPFHLPPCAGAR
RWELTFDTSQPEGAKTRAYRIGQVYAVTARSVVLFALQP
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgcgcatcagtgagggtctgccctatccactgggagcaacctgggatgggctg
ggcgttaatttcgcgctgttttccgccaatgcgacaaaagtcgagctctgtctgttcgat
tcttcgggcatgcgggagttacagcggattgaattacccgaatataccgatgaggtctgg
cacggctatttgccggatgcccggcccgggcaggtctatgcctatcgtgtacacggtccc
tatgcgccggaggtcgggcaccggttcaatccacacaaactgctgcttgatccttatgcc
aaggcgatggtgggcgatctgcactgggatgatgcctgccacggctatatcatcggcgat
gagaaggaagatctttcatttgatacgcgtgatagcgcacgattcatgccgaaatgccgg
gtgatcgattccgctttcacctgggggagagatcatccccccagcgtgccatgggaaaaa
acggttttctacgaaacccacctgcgcggctacaccatgcgtcatcccatggtgccggag
cctttgcgcggcacgttcgccggtatgtcggtgaaggaagtggtgaagcatatcagatcg
ctcggtgtgacctccatcgagtttctgccggttcattacttcataaatgatcgtttcctg
atcgaacagaatctttccaattactggggctacaacacgatcagctttttcgcaccccat
ccgcgttattccgccaccggtgcagtggcggagttcaaggagatggttgcgcatctgcat
gatgccggtctcgaagtgattctggatgttgtctataaccacaccgccgaaggaaatgag
cggggcccgaccctttctttccgcggtattgacaatgccagctattaccggctggcccct
gatccacgttactatatcaacgataccggcaccggaaacacgctgaatctgtctcatccc
cgggtgttgcagatggtgactgacagccttcgctattgggtggaggaaatgcatgttgat
ggtttccgcttcgacctcgcaactattcttgcccgtgaagcctacggattcgatgaagga
ggcggctttctggacagctgccggcaggatcctgttctctcccgcgtgaaactggtggcg
gagccgtgggatctggggccgggcggctaccaggtcggtggttttccgcccggctgggcc
gagtggaacgaccggtttcgcgatacggtacgcggtttctggaaaggggaggaaacagcc
tccgccatggctgcgcggctatgcgcttcggccgatatttataaccgtcgtggccgcaag
ccatgggcgagtgtgaatttcgtcactgcccatgacgggttcaccatgcaggatgtcgtc
acctacaacgacaagcataatgaggcgaatggcgaggataacaaggacggccattctcat
aaccgctcctggaattgtggagtggaagggccgagcgacgatccggcgctctgtgcattg
cgggagcggcagaagaggaatcttatggcgacgctgttccttgcgaagggaacgccgatg
ctgctggcgggcgacgagttcggacgcacgcagcaaggcaataacaatgcctattgtcag
gataacgagatttcatgggttgactgggacatcgatgcggatggtcataccctgatagcc
tttgtgcggacgctgatttccttgcgggagcggttccccatcctgcgacgcggacgtttt
ctgacgggtgcctatgatgaggaactcggtgttcaggatgtcacctggatcgctgccagt
ggcgacacgatggaacctgccgattgggaaaacggcacacggtgtttcggcatgctcatg
gacgggcgagcacaggccagtggtgtcagacgggccggaacggacaccacgctgctggtg
atttacaacgcccatcatgaggaggtaccctttcatttaccaccctgtgccggggcacgg
cgatgggagctgacattcgataccagtcagccggaaggtgccaaaacccgtgcctatcgg
attggacaggtttatgctgtcacagcgcgatcagtggttctgttcgcgctccaaccctga
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