Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_2353
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Entry
GbCGDNIH4_2353 CDS
T03156
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbs03016
]
GbCGDNIH4_2353
Enzymes [BR:
gbs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GbCGDNIH4_2353
Transfer RNA biogenesis [BR:
gbs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GbCGDNIH4_2353
Prokaryotic type
GbCGDNIH4_2353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AHJ66887
LinkDB
All DBs
Position
complement(2632588..2633517)
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AA seq
309 aa
AA seq
DB search
MSMNRRRKGRPLDGWLIIDKPQGMTSTDVVNRVKRGFDARKAGHGGTLDPLATGLLPIAF
GAATKTVPYVMDGTKLYHFTLKMGESRDTDDAEGAVTATSTVRPTDDVLRAALESFRGTI
MQIPPAYSAIKVAGERAYDMARDGRPPDLPPRPARVDRFELIERLDDDLAVFEVQSGKGV
YMRSLARDIARACGTVGHIAALRRLRVGPFTEATAISLDKALASGDTPHASPDLLLPVAT
ALADIPALALTEQEATGLSHGQALSLIPLMGRIPDRIDPDGGLVRAMAGSRVVGLCRLQD
GLLRPERMM
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatgaacagacgcagaaaaggtcggcctctcgatggctggctgatcattgacaag
ccgcagggcatgaccagcaccgatgtggtgaacagggtcaagcgcggcttcgatgcccgg
aaagcggggcatggcggtacgctggacccgctggcgaccggtctgctgccgattgcgttc
ggggcggcgaccaagacggtgccttatgtgatggacggcacgaaactgtatcatttcact
ctgaaaatgggcgagtcgcgcgatacggacgatgccgagggcgcagtaaccgccaccagc
acggtgcgtcccaccgacgatgtgctgcgggcggctctggagagttttcgcggtacgatc
atgcagattcctcccgcctattcggcgatcaaggtggcgggggagcgcgcgtatgatatg
gcgcgggatgggcgtccgcccgatctgccgccccgccccgctcgggtggaccggttcgaa
ctgatcgagcgtctggatgatgatctggcggtgttcgaggtccagtccggcaagggcgtc
tatatgcgcagcctcgcccgcgatattgcccgcgcctgtggaacggtgggtcatatcgcg
gccctgcgtcggctgcgggtcggcccctttacggaggcgacggctatttcgctggacaag
gcgctggcttccggcgataccccccatgcttccccggaccttttgcttccggtcgcgacc
gcgctggccgacatcccggcgctggccctgaccgagcaggaggccaccggcctttcccat
gggcaggcactcagcctgattccgttgatgggccgtattccagaccggatcgatcccgat
ggtggattggttcgcgccatggcggggagccgcgtcgttggtctgtgccgcttgcaggat
ggtctgctgcggcctgaacgcatgatgtga
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