Gottschalkiaceae bacterium SANA: SANA_00180
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Entry
SANA_00180 CDS
T10478
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
gbx Gottschalkiaceae bacterium SANA
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gbx03021
]
SANA_00180
Transcription machinery [BR:
gbx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SANA_00180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
HTH_23
GntR
KORA
HTH_50
GerE
HTH_31
DUF1492
Motif
Other DBs
NCBI-ProteinID:
BES63579
LinkDB
All DBs
Position
15907..16689
Genome browser
AA seq
260 aa
AA seq
DB search
MVRAKDRPNYRKNKEIIQNLFREYAVSRDPVVRDELIRRNLYIAEILAKKYANKGIEYED
IYQVASLGLIYAIDRYDLTKGFEFSSFATPTIIGEIKKYFRDKGWSIRVPRRIQELSKKI
NNAKLDLGQKLHRPPTVQDISDYLGVSEESILEAMEASNVYNLHSLESSFDSDSEDKDLN
LSLFLGEDDRNFQRFENQDFLLRAMEKLTEIEKTILKERYIQQKTQVRIAEDLGMSQMTV
SRLEKRIIAKFRKELMRTEN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggttagagcaaaggatcgtccgaattatcgcaagaataaggaaataattcagaacttg
tttcgagaatatgccgtatctagggatccggtagttcgcgatgaattaattcgtcgaaat
ctttatattgcggaaattcttgccaagaagtatgcaaacaaagggatcgagtacgaagat
atctatcaagtcgcttcgttgggattgatctatgcgattgatcggtatgatctgactaag
ggatttgaattttctagttttgcgaccccaacaattattggagagattaaaaagtatttc
cgagataagggatggtcgattcgagttccgagaaggattcaagaattgtcgaagaagatc
aacaatgcgaaactagacttgggacaaaagctgcatcggccgccaacggttcaagatatt
tctgactatcttggtgtttcagaagaaagtatattggaagcgatggaagcaagcaatgtt
tataatcttcattccttggaatcaagctttgattcggatagtgaagataaggatttaaat
ttatccttatttttgggagaagatgatcggaacttccaacgatttgaaaaccaagacttc
ttattgagggcaatggaaaaattaacagagattgagaaaacgatcctgaaggagcgatac
attcaacaaaagactcaggttcgtattgcggaagacttaggtatgtctcaaatgactgtt
tctagattagaaaagagaattatcgcgaaattccgcaaagaattgatgcgaacagaaaat
taa
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