Gottschalkiaceae bacterium SANA: SANA_09880
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Entry
SANA_09880 CDS
T10478
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbx Gottschalkiaceae bacterium SANA
Pathway
gbx03420
Nucleotide excision repair
gbx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SANA_09880
03430 Mismatch repair
SANA_09880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbx03400
]
SANA_09880
Enzymes [BR:
gbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SANA_09880
DNA repair and recombination proteins [BR:
gbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SANA_09880
MMR (mismatch excision repair)
Other MMR factors
SANA_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
AAA_11
AAA_22
TY-Chap1
Motif
Other DBs
NCBI-ProteinID:
BES64549
UniProt:
A0AA48LD99
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All DBs
Position
1059536..1061398
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AA seq
620 aa
AA seq
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MFNEKKLPDNHVDDWVDEEILSCINLENPKSFVLYAGAGSGKTRSLVKLLTNIPESVRNG
MNSYGRQVAVITYTNAASDEIRSRIKFDSLYHISTIHSFAWTIIEGYTEDIRRWLKTQLK
NDIEVLENKIERARKASAKEGYIRKRNKKEERLKLINGVLQFIYSPTGNNTSIDSLTHAE
VIKICAFFINEEPVFREILIGRFPIILVDESQDTAKPLMEALLELQKKQSHQMTLGLFGD
MMQRIYMDGMPNLEGEIPDSWERLDKQMNHRSQKRIVELVNSIRNNGDKKFQRNREDKPN
GLVHAFLVEGIRRSIHQVETKVVDAMVDLTGDLDWGNNELSSRRLILEHRMAANRLGFIE
VFNAINSVGSYKDSIKEGNLKELLFFTEQVFPLMEMIEVGDEYSTCQILDEYSERYSSIT
IGDPSEIKKRLDCFLETVMLMREACMDVEENISTYTLVKYLYDNKILSIPEDLESALLDF
YEKEKSSNKSVAWCGVYNRNIEELRMLADYYSDATGYATHQGVKGLEYKHVMGIISDDEA
VGNSFSYEKLFGVKELTITDKKNIREGRDSSLGRTNRLFYVLASRAEESLALVMYTGDTL
ALKKFLIDNAYFNDNEITVL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgagaaaaaacttcctgataatcatgttgatgattgggtcgatgaggaaata
ctttcgtgtattaatctggaaaatccaaagagttttgtattatatgcaggtgcaggctca
ggtaaaaccagatctcttgtaaaacttcttactaacattccagaaagcgtaagaaacggc
atgaattcctatggacggcaggtagcagttattacttatacaaatgcagcgagcgatgaa
attagaagtcgtataaaatttgattcgctttatcatatttcaacaattcatagctttgcc
tggacgattattgaggggtatacagaggatattcgaaggtggctgaagactcaacttaaa
aatgatattgaagtgctggaaaataagattgaaagagcacgaaaagcgtcagcaaaagag
ggatatatacgtaagcgtaataaaaaagaagaacgcttaaaattgatcaatggcgttctt
caatttatatatagtccaacagggaataatacatcgattgattcccttacgcatgcagag
gtgattaaaatctgtgcattctttattaatgaagagccagtgtttagagaaattcttatt
gggcgttttccgattatacttgtggatgaaagtcaagatactgcaaaaccgttaatggaa
gcgttactagaattgcagaaaaagcagtcgcatcaaatgactttaggactatttggtgat
atgatgcagcgaatatacatggatgggatgcctaatcttgaaggggagataccggattcc
tgggagagactagataagcagatgaatcataggtcacagaagcgcattgtggagcttgtt
aatagtatacgaaataatggtgacaagaaatttcagagaaatagagaagacaaaccaaat
ggtctagtgcatgcctttcttgttgagggtatcagaagatctattcatcaggtagaaaca
aaggttgttgatgcaatggttgacttaactggtgatttggattggggcaataatgagttg
agttcacggaggttgattctagagcatagaatggcggctaatagattagggtttattgaa
gtctttaatgcaatcaattctgtgggttcttacaaagatagtattaaagagggaaaccta
aaggaactgttgttttttacagaacaggtgtttccacttatggaaatgatagaagtagga
gatgaatatagtacctgtcaaattcttgatgaatattccgaaaggtattcgagtattact
attggtgatccaagtgagataaaaaaaaggcttgattgttttttagaaacggttatgttg
atgagagaagcatgtatggacgttgaagagaatatatcaacatatacccttgtcaaatac
ttgtatgataataaaatattgagcattccagaggatcttgagtcggcattgctagatttt
tatgaaaaagagaaaagcagcaacaagtctgttgcttggtgtggcgtttacaatagaaat
attgaagaactacgtatgcttgcagattattattctgatgctactggttacgcaacacat
caaggagtcaagggccttgaatacaagcatgttatgggaattattagcgatgatgaagcg
gtcgggaactcctttagctatgaaaaactatttggtgtaaaggaactgacgataacagat
aaaaagaacattagagaaggtagagacagcagcttgggtaggacgaacagacttttttat
gttttggcttctagagcggaagaaagtcttgcgcttgttatgtacactggtgatacttta
gctttgaagaagtttctcattgataatgcatattttaatgataatgaaatcactgtatta
taa
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