Gottschalkiaceae bacterium SANA: SANA_15400
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Entry
SANA_15400 CDS
T10478
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gbx Gottschalkiaceae bacterium SANA
Pathway
gbx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SANA_15400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbx03400
]
SANA_15400
Enzymes [BR:
gbx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SANA_15400
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SANA_15400
DNA repair and recombination proteins [BR:
gbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SANA_15400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Zn_ribbon_TFIIB
Zn_ribbon_3
YhfH
DZR
DNA_ligase_ZBD
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
BES65101
UniProt:
A0AA48R0W8
LinkDB
All DBs
Position
1663945..1664772
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AA seq
275 aa
AA seq
DB search
MIELPEAMVLAKQCNQFIVGKVIEEIRVNQSPHKLAWFVGDPEDYIKKLTGKTIEKASAI
AGFIELKIEDVRLAFSDGVQLLYTQEGKQIPKKHQLMIRFTDQSVFTAKVQMYGGIWCFQ
PDEWENKYYEIAKVKPSPLTESFSEAYFKQLMSSEKMMKLSAKAFLATEQRIPGLGNGIL
QDILFAAGIHPKRKLYTFSESEKSILYSELIAVIKMMVEQNGRDTEKDLFGNPGGYGTKM
SRKTVGKPCPKCGEPIQKQAYMGGSVYACPNCQIE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgattgagttaccagaagccatggttttagcgaaacaatgtaatcaatttattgttgga
aaagtaatcgaagaaatccgagtcaatcaaagtccgcataagttggcctggtttgttggg
gacccggaagattatatcaaaaaattgaccggaaagacgattgaaaaggcttcggccatt
gcggggtttattgaattaaagattgaggatgttcgtcttgcatttagcgatggtgttcaa
ttgctctatacgcaagaaggcaaacaaattcctaaaaaacaccaattgatgattcgattt
acggatcaatctgtatttacggccaaagttcagatgtatggtggaatatggtgttttcaa
ccggatgaatgggagaacaagtactatgaaattgcaaaagtgaaaccatcgcctttaaca
gaatcattttcagaggcatatttcaaacagctgatgtcgagtgaaaagatgatgaaactg
agtgcaaaggcctttttggcgacagaacagagaattccaggattggggaatgggatcttg
caagatatcctttttgcggcgggcattcacccaaagcgaaagctatatacattttcagag
agtgagaaaagtattctgtattccgaactgatcgctgtgattaagatgatggtagaacaa
aatgggcgcgatacagagaaggatctttttggaaatcctggtggatatggtactaaaatg
agccgtaagactgtcgggaagccctgtccaaaatgtggagaaccgatacaaaagcaagca
tatatgggagggagtgtatatgcttgcccgaattgccaaatagagtag
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