Gottschalkiaceae bacterium SANA: SANA_16170
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Entry
SANA_16170 CDS
T10478
Symbol
truA_1
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gbx Gottschalkiaceae bacterium SANA
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbx03016
]
SANA_16170 (truA_1)
Enzymes [BR:
gbx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SANA_16170 (truA_1)
Transfer RNA biogenesis [BR:
gbx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SANA_16170 (truA_1)
Prokaryotic type
SANA_16170 (truA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF4026_N
Motif
Other DBs
NCBI-ProteinID:
BES65178
LinkDB
All DBs
Position
1749569..1750306
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AA seq
245 aa
AA seq
DB search
MTTFKMTIAYDGTKYQGWQRLGNTDMTIQGKIEAVLSRIYTRPILIDGSGRTDAGVHAKG
QIASVELPKNRIDPKSLGEINHYLPEDIQIMSMEKADDRFHARFNAKQKIYRYRISVSPS
GNVFERKEMIRIEEPLNLEAMRSAASYLIGEHDFQSFTAMKSKTKSTVRTIESITVTALS
DEIQIDFLGSGFLRQQVRLMMGLLIQVAQGVVKPKAVKDILDEKSRANTRAVAPAKGLCL
ERVIY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttttaaaatgaccattgcctatgacggcacgaaatatcaaggatggcaacga
ttgggtaatactgatatgaccattcaaggaaaaattgaagcagttttatcgagaatatac
acccgtccaattttgatcgacggttcaggacgaactgatgccggcgttcatgcaaagggg
cagattgcttctgtggaactaccgaaaaatcgaattgatcctaagtctttgggcgaaatc
aaccattatcttccggaggatattcaaatcatgtccatggaaaaggcggatgatcgtttc
catgctagatttaatgccaagcaaaagatttatcgttatcgaatttctgtttctccatct
ggaaatgtgtttgagagaaaagaaatgattcggattgaagagcctctgaacttagaggca
atgcgcagtgctgctagctatttaataggcgagcatgattttcaatcatttacggccatg
aaatcaaagacaaaatccacggttcggacgattgagtcgattactgttacagctttgtca
gacgaaatacaaatcgattttttaggaagtggatttctgcgtcagcaagtacgcttgatg
atgggacttttgatccaggttgcccaaggcgttgttaagccgaaggcggtaaaagatatt
cttgacgaaaaatcacgagccaatacgagagcagtagctccagcaaagggtttgtgtttg
gagcgtgtcatctactag
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