Gottschalkiaceae bacterium SANA: SANA_16880
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Entry
SANA_16880 CDS
T10478
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
gbx Gottschalkiaceae bacterium SANA
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gbx03036
]
SANA_16880 (smc)
Chromosome and associated proteins [BR:
gbx03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
SANA_16880 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
SbcC_Walker_B
DUF6900
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BES65249
UniProt:
A0AA48R1D2
LinkDB
All DBs
Position
1831647..1835210
Genome browser
AA seq
1187 aa
AA seq
DB search
MYLKRIEMKGFKSFANRTALNFEPGITCIVGPNGSGKSNISDAIKWVLGEQSSKALRGEK
MEDVIFAGTHKRKATGYAEISLILDNEERSLPIDYSEVAITRRLYRSGESVYAINRKSVR
LKDIRDIMFDTGLGVNGYSMISQGKIDHILSKDSSERRAVFEEAVGIAKIKSKKEETGRK
LERTEQNLERVQDILLELEQQLEPLQVEAEEAKKYKLLFEDMRSLDVSLVINDHDHTKKR
VLQIRERNEFAQERLSLLTDDRMRLRENLNERETFFVEKEEALREAEQGHQTLQIQKANL
DHEHSRIKEKEEALEKERLELEEKSETTKALQVKERGRFSIIEEEFLALNRELDNIETEL
SQLDSGNEELESQRTSMMEALDQKRKSLHNLTNRLSQAKELHNEYRQKYFEVAGEKKRYE
DLLQQQNEKAITKEAELEKIMAKQKEEAASLTKNQEAYDDSGLKRENLIYQLREEKNTLS
QVDHDLDRIGNKIQFEKRAIDGYEGYFRGVRQIMGERDNEPQMKKRILGVVTDLIDVQPK
YHKAIETALGNALQNIVVRTEEDLKSIVRTVKKKRFGRITILPMDLIRPNSMPERDQDAG
MLASQAVNCKDEFIPVVQFLLARTFIAETMDEGLAIAKKTKMRYRVVTIDGNMIRPGGAV
STGELNREGGLLERKSLLSQYQQEKETYTNKKRTIQTRLQGIAKELEEQEHLMQESKDRK
DFIEIQVKTLLNQVTFLQRDHETLIREKRGYQNTYEQLCRDEERMSHQISHADEEQNDLT
EQRTILETEIEEGSTKMKDLERKMLKDLNVRQPKEVQRASLLEKIHHKEFLRNEYQNRMS
AFQSQLDEGQFNQTRNREDRIGIQRKIQELDQQMILMLSRMTDAEERRNALTQEIQEAKQ
TSQSMNQRYYEIDDELSELKDRLRKDEVNLTKSEMQEKQQVEYLWEQYQMSIAMARKIAL
EDFAVATARSTVKDLKKQIRDLGEVNLTSIQKFEEVNERFTFLSQQQADLLSAKKDLESL
IHELVDSMEKSFLAEMEAIRKQFTQTFTHLFGGGDADIQLLDPSQPLTTPIRIVAQPPGK
KLSNISVLSGGEKALTAIALMFAIIQLKPTPFCVLDEIEAALDDANIKRFTDFLQEHSAM
SQFIIITHKQETMRAAKVLYGITMPEKGVSSVLSVKLEDLKPEEYIN
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
gtgtatttaaaaagaatcgaaatgaaaggattcaagtcttttgccaatcgaacagcattg
aactttgagccgggaatcacctgtatcgttggtccgaacggcagtgggaagagcaatatt
tctgatgcgatcaaatgggtcttgggtgaacaaagttccaaagccttgcggggcgaaaaa
atggaagatgtcatctttgcaggaacccacaaaagaaaagcaacgggatacgcggaaatt
tctttgatcctcgataacgaggaacgttcacttcctattgattattccgaagtcgctatt
acccggaggttgtatcgttcgggagaaagtgtctacgccatcaaccgtaaatctgttcga
ctaaaggatatccgagatattatgtttgatacaggactgggtgttaatggctactccatg
atcagtcaaggaaaaattgatcatattctaagcaaggactctagtgaacgccgcgcggtt
tttgaagaagctgtgggaatcgcgaagattaagtcgaaaaaagaagagacgggtcgaaag
ttggagcggacagaacaaaatctggagcgagttcaagatatattgttggaacttgagcaa
caattagaaccccttcaagtggaagctgaagaagcaaagaaatacaaacttcttttcgaa
gacatgcgcagccttgatgtcagtttggtcattaatgatcatgatcatacaaaaaaacgt
gtgctacaaatccgggaacgaaatgaattcgcccaagaacgcctaagtctacttacagac
gatcgtatgaggttgagggaaaaccttaacgaacgggagactttctttgtggaaaaggaa
gaagcccttcgcgaggcagaacagggccatcaaaccttacaaattcaaaaggcaaacctg
gatcatgaacactcacgaattaaggaaaaggaagaggctctagaaaaagagcgcctcgaa
ttggaagaaaaatcagaaacgacaaaagcccttcaagtaaaagaacgcggccgtttttct
attattgaagaagagtttttagccttaaatcgtgaattggataacatcgaaacagaatta
agtcaattggactctggaaatgaagaacttgaaagccaacgtacttccatgatggaagcc
cttgatcaaaaacgaaagtcccttcacaatctaaccaataggctctcgcaagccaaggaa
cttcacaacgaatacaggcaaaaatattttgaggtagccggcgaaaaaaaacggtacgaa
gacctgcttcaacaacagaatgaaaaggcaattactaaagaagcagagttagaaaaaata
atggccaagcaaaaggaagaagctgcaagcttaacgaaaaatcaagaagcctatgacgat
agcggtttaaagcgggaaaacttgatctatcaattgcgagaagaaaaaaacactttgagt
caggttgaccacgacttggatcgcattggcaataaaattcagtttgaaaaacgcgcgatc
gacggatatgagggatatttccgcggtgtccgccaaattatgggagaacgtgacaatgaa
ccccaaatgaaaaaaagaattcttggtgttgtcacagacctaattgatgtacaacctaaa
taccacaaagccattgaaacagctttgggtaatgcccttcagaatattgtggttcgtacg
gaagaagacctcaaatccattgttcgcactgtcaagaaaaagagatttggtcgaattacg
attttacccatggacttgattcgtccaaattcaatgccggaaagggatcaagatgctggt
atgcttgcttctcaagcagtcaactgcaaagacgagtttatcccagttgttcaattctta
ttggcaagaacctttattgcagaaaccatggatgaaggcctagccatcgcaaaaaagact
aaaatgcgttaccgcgtagtgaccattgacggtaacatgattagacctggcggagctgta
tcaacgggtgagttgaatcgagaaggtggtttgctggaacgaaaaagtctcttgtctcaa
tatcagcaggaaaaagaaacatacaccaacaaaaaacggaccattcaaacgcggcttcaa
ggcatcgccaaggaactggaagaacaggaacatttgatgcaagaaagcaaggaccgaaaa
gactttattgaaattcaggtaaagaccttgttgaatcaagttaccttcctgcagagggac
cacgaaaccttaatccgagagaaacgcggttatcaaaacacttacgagcaattgtgccgt
gatgaagaacgaatgagccatcaaatttcgcatgctgatgaagaacaaaatgacctgaca
gagcagcgaacgatcctcgagactgaaattgaagagggttccacgaaaatgaaagatctg
gagcgtaagatgcttaaagatctcaatgttcgtcaaccaaaagaagtacagcgggcgtct
ttgctggagaagattcaccataaagaatttttgcgtaacgagtatcaaaacagaatgagc
gcctttcaatcccagcttgacgaggggcaatttaatcaaacaaggaatcgcgaagatcga
atcggcattcaaagaaagatccaggaacttgatcaacaaatgatcctgatgctttcacgt
atgacagatgcagaggaaaggcggaatgctttgacgcaagaaatacaggaagccaagcaa
accagtcaaagtatgaaccaacgttattacgaaatcgatgatgagttgtcggagttaaaa
gatcgattgcgaaaagatgaagtgaatcttaccaagagtgagatgcaagaaaaacaacag
gttgaatacctttgggagcagtatcaaatgtccatcgccatggctcgaaaaattgccctt
gaagacttcgccgtcgctacagcacgaagtaccgttaaagatcttaagaaacaaatacgg
gacctgggagaggtcaatttgacatccattcaaaaattcgaggaagtcaatgaacgtttc
acttttctcagccaacagcaagcggatttactttctgcaaaaaaagatctagaatctttg
attcacgaattggttgattctatggaaaagagttttctggctgaaatggaagcaattcgc
aaacaatttacacaaacctttacccatctctttggtggaggagacgccgatattcaacta
ctcgatccatctcaacctttgaccacgccgattcgcatcgtcgcacaaccaccagggaag
aaactttctaacatatcggtactatccggtggagaaaaggctttaacagcaatcgctttg
atgtttgcgattattcaattgaaacccacgcccttttgcgtgctcgatgagattgaagca
gccctagatgacgcgaatattaaacggtttactgactttcttcaggagcattctgccatg
tctcaattcatcatcatcactcataagcaagaaaccatgcgcgctgcaaaggtcttgtac
gggattaccatgcctgaaaagggagttagttcggttttgtctgtgaaattggaggacctg
aaaccagaggagtatattaattag
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