Gottschalkiaceae bacterium SANA: SANA_18250
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Entry
SANA_18250 CDS
T10478
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gbx Gottschalkiaceae bacterium SANA
Pathway
gbx00260
Glycine, serine and threonine metabolism
gbx00460
Cyanoamino acid metabolism
gbx00630
Glyoxylate and dicarboxylate metabolism
gbx00670
One carbon pool by folate
gbx00680
Methane metabolism
gbx01100
Metabolic pathways
gbx01110
Biosynthesis of secondary metabolites
gbx01120
Microbial metabolism in diverse environments
gbx01200
Carbon metabolism
gbx01230
Biosynthesis of amino acids
gbx01240
Biosynthesis of cofactors
gbx04981
Folate transport and metabolism
Module
gbx_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SANA_18250
09102 Energy metabolism
00680 Methane metabolism
SANA_18250
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SANA_18250
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SANA_18250
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SANA_18250
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SANA_18250
Enzymes [BR:
gbx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SANA_18250
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Lactamase_B_3
Motif
Other DBs
NCBI-ProteinID:
BES65386
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All DBs
Position
complement(1962814..1964046)
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AA seq
410 aa
AA seq
DB search
MNFEQVMKTDPEVYEAIQLEKNRQSDKIELIASENFVSESVMEAMGSYLTNKYAEGYPGK
RYYGGCEFVDVVEDLARDRMKELFGADHANVQPHCGANANLGVYFAILKPGDTVLGMNLS
HGGHLTHGSPVNISGTYFNFVSYGVDKETQVIDYDAVMELAKEVKPKLIVAGASAYPREI
YFDKFKEIADAVGAYLMVDMAHIAGLVAAGLHQNPVAYADFVTTTTHKTLRGPRGGAILC
KQEYAKKIDKAMFPGTQGGPLMHVIAAKAVSFKEALTPEFKVYQQKIIDNASALSQALLK
RGFTLVSGGTDNHLVLVDVRNRNMTGKVAEHLLDEIGITANKNTIPFDPESPFVTSGLRL
GTPAITTRGFTEADMDVIAEIFELTLKENADPEQAKKLVDSLCSKYPLYR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaacaagtaatgaaaactgatccagaggtgtatgaggcgatacaattagaa
aaaaatcgtcaatccgataaaattgaattgatcgcatcagagaattttgtctctgagtcg
gtgatggaggcaatgggaagctatttgacaaacaaatacgctgaaggctatcctgggaaa
cgatactatggcggctgtgagtttgttgatgttgtagaagacctcgcgcgagatcgcatg
aaggaattatttggcgcagaccatgccaacgtgcaacctcattgtggagctaatgcaaat
ctaggtgtttattttgctattttaaagcctggcgatacggttcttggcatgaacttgtcc
catggtggacatttgacccatggcagtcccgttaatatttccggcacatattttaatttt
gtaagttacggcgtggataaagaaacgcaagttattgattatgacgcagtgatggagttg
gcaaaagaagtgaagccgaaactgatcgttgctggggcgagtgcctatccacgagaaatt
tattttgataaatttaaagagattgccgatgctgttggcgcttacttgatggttgacatg
gcgcatattgctggacttgttgcagcgggcttgcatcaaaacccggtagcctatgctgat
tttgttacaacaactacccataagactttacgcggcccaagaggcggagccattctttgc
aagcaagaatacgcgaagaagattgataaagccatgttcccaggcacccagggcggtcct
ttgatgcatgtgattgcggcaaaagcggtcagcttcaaggaagctttgacaccagagttc
aaagtgtatcagcaaaagatcattgacaatgcatctgctctaagtcaagctttgttaaag
cgtggatttactcttgtttcagggggaacggataatcacttggtcttggttgatgttcga
aaccggaatatgactggaaaggtagccgagcatcttttggatgaaatcggaataactgcc
aacaagaataccattccatttgatccagaaagtccatttgtgactagcggacttcgattg
ggtacaccggcgattacaactcgagggtttacagaagcggatatggatgttattgctgaa
atatttgaattgacattgaaagaaaatgcggatcctgagcaggcaaagaaattggttgac
tcgctttgctccaagtatccattatatcgatag
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