Gottschalkiaceae bacterium SANA: SANA_20640
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Entry
SANA_20640 CDS
T10478
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gbx Gottschalkiaceae bacterium SANA
Pathway
gbx03420
Nucleotide excision repair
gbx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SANA_20640 (pcrA)
03430 Mismatch repair
SANA_20640 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbx03400
]
SANA_20640 (pcrA)
Enzymes [BR:
gbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SANA_20640 (pcrA)
DNA repair and recombination proteins [BR:
gbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SANA_20640 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SANA_20640 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DUF3553
DEAD
DUF1441
Motif
Other DBs
NCBI-ProteinID:
BES65625
UniProt:
A0AA48R1M1
LinkDB
All DBs
Position
complement(2247293..2249515)
Genome browser
AA seq
740 aa
AA seq
DB search
MQLTDLNKKQREAAETVLGPVLILAGAGSGKTRALTYRIAHLVEHHRVYPENILALTFTN
KAAAEMRNRVEKLIEGNVRSLWMGTFHSVCARLLRQDIERLGYQRNYTIYDSSDQLALMK
RVVRTDLNLNEKKYDPKSMIHYVSSQKNLFILPAQALKAAEGRYAEEFKAKIYAAYQKRL
KESNALDFDDLIILTLRLFNECPDILERYQERFQYIHVDEYQDTNHAQYLLVKKLAAAHH
NLCVVGDDDQSIYGWRGADIRNILDFEVDFPEAKVIKLEQNYRSTNTILSAANDVIANNN
GRKDKRLWTEKEDGTKISLYSADNEQDESLYIAHQIERIREDSDRAYLDFAILYRTNSQS
RVLEDALRKKHFPYRIVGGLKFYDRKEVKDIVAYLKVLVNPKDDVSLRRIVNVPKRGIGD
RTVELLLAFAQEEDLSMVDAISRVEEVNGLTNSARTRLAQFAQMIGKFRTYMETESLLEC
YNRVIQESDYIPYLERENSVEADARIDNIYEFRSVIQDYEAAAEEPGLMDFLSSVALLSD
LDKAAEGDVDENDKITLMTLHSAKGLEFPIVFLSGMEEGMFPLSRSTQSEDDLEEERRLC
YVGITRAEEELYLTHTDVRMLYGRHTNNMVSRFVKEIPVKYIERANPNKKERLPEKMEPT
RRKTVFDDLEAFKSINREKKKSKPMDDKTYKAGQRVRHKSWGVGTIVSAQAKGQDTMLTI
AFEQKGIKKLLQSFAPIEKI
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaacagacttgaataaaaaacaacgggaagcagctgaaacagtattgggacca
gttttgatattagcaggtgccggttcaggaaagacccgtgcgctcacctatcgaatcgca
catttagtcgagcatcatcgggtatatccagagaatattctggctcttacttttaccaac
aaagcagcggcagagatgaggaatcgtgtagaaaaattgattgaagggaatgtacgctct
ttgtggatgggtacctttcactctgtttgtgcaagattgttgagacaggatattgagcga
ttgggatatcaacgtaattatacaatctatgatagttcagatcagctggcgttgatgaag
cgcgtcgttagaaccgacttgaatctgaatgaaaagaagtatgatccgaaatcgatgatt
cattacgttagcagtcaaaagaacttatttattctgccggctcaagccttgaaagccgcg
gaaggccgatatgcagaagagtttaaagcaaagatttatgcagcctatcagaaacggctg
aaggaaagcaatgccttggattttgatgatttgatcattctaacccttcgcttatttaat
gagtgtcccgatatattggaacgatatcaggagcgatttcaatatattcacgtggacgag
tatcaggatacgaaccatgctcaatatttattggtgaaaaaattggcggctgcccatcac
aatctttgtgttgtgggagacgatgatcaaagtatttatggatggcggggtgcagatatt
cgcaatattttggatttcgaagtcgattttccagaagcgaaagtcattaaattggagcaa
aattatcgttcgaccaataccattctttcggcggcgaatgacgttattgccaacaataat
ggaagaaaagataaacgcttgtggaccgagaaggaagacggaacgaaaatcagtctatat
agcgcggacaacgaacaggacgaatcgctttatattgctcatcagattgaacgcattcgt
gaagattctgatcgtgcctatcttgattttgccattctctaccggacaaactcgcagtcg
cgtgttttagaggatgcgcttcgaaagaagcattttccctatcgaattgttggtggattg
aaattctacgatcgaaaagaggtcaaggatattgtagcctacctaaaggtgctggtgaat
ccgaaagatgatgttagtcttcgtcgaatcgtcaatgttcctaaaagaggaatcggtgac
cgaacagtcgagttgttgttggcttttgcccaagaagaagacttgtctatggttgatgca
attagtcgggttgaagaagtcaatggattgactaatagcgctcgaacacgcttggctcag
tttgctcaaatgattgggaaattccgcacctatatggaaacggaatctcttttggaatgc
tataaccgggtgattcaagagtctgattatattccgtatttggaacgagaaaactcggtg
gaagcggatgcgcgaattgataatatttacgaatttagatcggttattcaggattatgaa
gcagcagctgaagagccgggtttaatggatttcttatcgagtgtagccctcttatcggat
cttgataaagcagctgagggagatgtagatgagaatgacaaaattacattgatgacgcta
cattctgctaagggattggaattcccgatcgtctttttaagcggcatggaggaaggcatg
tttcctctgtctcgttctacgcaaagtgaagatgatttagaagaggaacgacgactgtgc
tatgttggaatcacccgtgcagaagaggaattgtatttgacccataccgatgtacgcatg
ctttatggacgtcatacgaacaacatggtatcgcggtttgtcaaagagattccggttaag
tatattgaacgagcgaatccaaataaaaaggaacgcttgccagagaagatggaaccaaca
cgccgaaaaacagtctttgatgatttagaggcatttaagtcgatcaatcgtgaaaagaag
aaaagtaagccgatggacgacaagacctataaagcgggccaaagagtacgacataagtca
tggggggttggaaccattgtttcagctcaggccaaaggacaagataccatgttgaccatt
gcctttgaacaaaaagggattaagaaactgcttcaatcctttgccccaatcgagaaaatt
taa
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