Gottschalkiaceae bacterium SANA: SANA_26720
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Entry
SANA_26720 CDS
T10478
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gbx Gottschalkiaceae bacterium SANA
Pathway
gbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SANA_26720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbx03400
]
SANA_26720
Enzymes [BR:
gbx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SANA_26720
DNA repair and recombination proteins [BR:
gbx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SANA_26720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
HHH
AAA_22
NAT10_TcmA_helicase
HHH_2
UvrD_C
T2SSE
PIF1
UvrD-helicase
Herpes_Helicase
SLFN-g3_helicase
Ribosomal_S13
RsgA_GTPase
HHH_3
cobW
AAA_28
nSTAND3
DEAD
NTPase_1
TrwB_AAD_bind
AAA_16
RecR_HhH
ABC_tran
DNA_pol_lambd_f
Melibiase_2_C
AAA_29
NPHP3_N
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BES66233
LinkDB
All DBs
Position
complement(2816956..2819178)
Genome browser
AA seq
740 aa
AA seq
DB search
MIERTGEIIEIIYRNEETGYTVAVLETDDTYFTIVGTFPFLKEEMPIRVSGDMIKHPKFG
EQLRVDHYEEVPPTDVDGILKYLGSGLIPGIGTKTAKRIVDAFGEETLDILQYNPERLKS
VDGIGHKKAETIATAFQEQRGIREIMLFLQNYGIGVANCLKIYKAYGNDAVKKVKNNPYM
LAKDVKGIGFVKADRIATSLGIDPNSSFRIHAGVLYSLEQLTNQGHTYAPKNMLVRQAKR
LLGAEILPIENTILEMAANRELKVVAGGEEDQVYLPAYFAAEAFSAQALITLATKNIDRD
EEMLKARIQSVQDQKKIDLALTQQKAIHTALTSAVTVITGGPGTGKTTTINTILDLAEDH
DLDILLAAPTGRAAKRMAEATGRESKTIHRLLEYGRSEGGEGLNFGRDEDNPLEGDLIII
DEASMIDILLFYYLLRAVPPEAQVILVGDVDQLPSVGAGNVLRDVIESGVVPVVRLTEVF
RQAQESMIVVNAHKINQGMEPEMNQKEKDFFFIRENHDQVLNTVVDLVVNRLPKWKGFDP
YQEIQVLTATRKRGVGVLPLNEALQAAMNPTGANKPEIELGTITFRLGDRVMQTRNNYQV
EWKRKVDGVYSGQGEGVFNGDFGRITGVNVKDKQVTVLFDEEKEILYEYNQLEEITLAYA
ITIHKSQGSEFPVVVIPLSSLPPMLETRNLIYTAITRAKQLVVLVGQTRVLERMIQNNQT
EKRYSGLKQKLQKAAEYLMD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagcgtacaggagaaatcatagaaatcatttatcgaaacgaggagacaggatat
actgtcgctgttttagagaccgacgatacctacttcaccatcgtgggcacttttcccttt
ttgaaagaagaaatgccaattcgcgtatcaggcgatatgatcaagcatcccaaattcggc
gagcaattgcgggttgatcattacgaggaagttccgcctacggatgtcgatgggatcctc
aaatatttgggatcgggtttgattccgggaattggaacaaagacagcaaagcggattgtg
gacgccttcggcgaagagaccttggatatcttgcaatacaatccagagcgattgaaatca
gtcgatggtattggtcacaagaaagcggaaaccatagcgaccgccttccaggaacagcgg
ggaattcgtgaaatcatgttgttcttacagaattacgggataggtgttgccaattgcttg
aagatctataaagcatacggaaatgacgctgtaaaaaaggtaaagaacaatccttatatg
ctggcaaaagatgtgaaaggaattggctttgttaaggctgaccggattgcaacaagcctg
ggcattgatcccaattcatcttttcgaattcatgcaggggttctttactccctggaacaa
ttgaccaatcaggggcatacctacgcgccaaaaaatatgcttgtgcgccaagccaagcga
cttttgggggctgagattctgcctattgaaaatacgattcttgaaatggcagcgaatcgg
gaattgaaggtggtagcgggtggtgaagaggatcaggtgtatctgccggcctattttgca
gcggaagcctttagtgctcaggccttgattacccttgcgacaaaaaacatagaccgtgat
gaggagatgctgaaggctcgtattcagtcggttcaggatcagaaaaaaatagatctggca
ttgacccagcagaaagcgattcatacggccttaacatctgcggtaacggtgattaccggg
ggtccgggtacgggaaagacgacaacaattaataccattttggatcttgcggaagatcat
gacttggatattctattggcagcacccacaggacgggctgccaaacggatggccgaagcg
acgggacgggaatccaaaacgattcatcgattgctggagtatggccgatctgagggggga
gaaggacttaattttggtcgagatgaagacaatcccttagaaggggacttgattatcatc
gatgaggctagcatgatcgatattttgttgttttattatcttttgcgggcggtgccgccg
gaagcccaggtgattttggtcggcgatgtggatcaattgccttctgtgggggctggcaat
gtgcttcgtgatgtgattgagagcggggttgtgccggtggttcgattgacagaagtcttt
cgacaggcgcaagaaagcatgatcgttgtcaatgcccataaaatcaatcagggaatggaa
ccagagatgaatcaaaaggagaaggatttcttctttattcgagagaatcatgatcaggta
ctgaatactgttgtggatctggttgtcaatcgtttgccaaaatggaaggggtttgatcct
tatcaagagatccaggtgttgacggcaactcgaaaacgcggtgtgggggtattgcctctt
aatgaagcgctgcaggcggctatgaatccaacgggtgccaataaaccggaaattgagttg
gggacaatcacctttcgccttggggatcgggtgatgcaaaccaggaataattatcaagtt
gagtggaagcggaaggttgatggcgtgtattccggtcaaggtgagggcgtgtttaatgga
gattttggtcgaattaccggggttaatgtgaaagacaagcaagtgaccgtgctttttgac
gaagagaaggaaatcctctatgaatacaaccaattagaggaaattacgttggcctatgcc
atcaccatccataagagccaaggaagtgaattcccagtggtggtcattccactgtcgagt
ttgccgccaatgttagagactaggaatctaatctatacagccattacgcgtgccaagcag
cttgtggttttggtcgggcagacgcgggttttggagcgtatgattcaaaacaatcaaacg
gaaaaaagatattcaggtttaaagcaaaaattgcagaaggcagccgagtatttaatggat
taa
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