Kamagatella elastica: SANA_29020
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Entry
SANA_29020 CDS
T10478
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gbx Kamagatella elastica
Pathway
gbx00521
Streptomycin biosynthesis
gbx00523
Polyketide sugar unit biosynthesis
gbx00541
Biosynthesis of various nucleotide sugars
gbx01100
Metabolic pathways
gbx01110
Biosynthesis of secondary metabolites
gbx01250
Biosynthesis of nucleotide sugars
Module
gbx_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SANA_29020 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SANA_29020 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SANA_29020 (rfbC)
Enzymes [BR:
gbx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SANA_29020 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BES66463
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All DBs
Position
complement(3079078..3079635)
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AA seq
185 aa
AA seq
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MKRIDKEVEGVCIIEPRVFGDSRGYFMETWSTRNFEEIGLNVSFIQDNQSFTQKKGTIRG
IHFQQNPMAQAKLVRVVTGAVMDYAVDLRKGSPTYRKWVCAELSADNKRQFYIPQGFGHA
FITLTDDVTFVYRCDNHFSKECDRGIRYDDPSIGIDWGTDNVFLSEKDIKSPWLDDSDCN
FVFQD
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgtatagataaagaggtagagggggtttgtattatcgagccacgggtttttggg
gactcacgtgggtattttatggaaacttggtctaccagaaattttgaagaaataggactg
aatgttagttttattcaggataatcagagtttcacacagaaaaaagggacaatccgtgga
atccattttcagcagaaccctatggcacaggctaagctggtaagggttgtaacgggtgca
gttatggactatgcggttgatctgagaaaaggatcaccaacttataggaaatgggtatgt
gcagaactgtctgctgacaataaacgccaattttatattccgcagggttttggacacgcg
ttcattactcttacagacgacgtaacatttgtttatcgttgtgataatcattttagtaag
gaatgtgatagaggaattcgctatgatgacccgtcaattgggatcgattggggtactgat
aatgtatttctttcagagaaggacatcaaatctccctggttagatgatagtgattgcaat
ttcgtatttcaagattaa
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