Gottschalkiaceae bacterium SANA: SANA_29850
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Entry
SANA_29850 CDS
T10478
Symbol
rocR_2
Name
(GenBank) arginine utilization regulatory protein RocR
KO
K06714
arginine utilization regulatory protein
Organism
gbx Gottschalkiaceae bacterium SANA
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gbx03000
]
SANA_29850 (rocR_2)
Transcription factors [BR:
gbx03000
]
Prokaryotic type
Helix-turn-helix
Other families
SANA_29850 (rocR_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA
AAA_22
Sigma54_activ_2
AAA_5
AAA_2
AAA_14
PAS
PAS_9
Mg_chelatase
AAA_16
nSTAND3
NACHT
ABC_tran
RecX_HTH2
AAA_19
SLFN-g3_helicase
PAS_4
AAA_24
TIP49
AAA_10
Motif
Other DBs
NCBI-ProteinID:
BES66546
UniProt:
A0AA48LH92
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All DBs
Position
3177716..3179128
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AA seq
470 aa
AA seq
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MNLTRDSLFTDKLMEGILDDANDGINVVDENGILLYSNRMSAVYANTTTDKMLGKPITDF
YSEAVLLTVLETKKAIRGQEIHYVDNKKYVVSSYPLIKDGVFVGAYSIFKDVRDIEELNR
KITLLELHLALNTSEEDILDIIGNSGSLMTVLRKAKRTVGSLGGPRHSIITGESGTGKTM
LANLIYNYAKQVGVIDQDAPFIEINCAQFTNPDIAAVEIFGSEAGAYTGSRQMKGLFEKA
NGGILFLDEAHALEQYQNILLKAVESGTIRRIGGTKEIKVDVIIIAASTKNLSQQLLPEL
YQRLAQYALHLPSLSERDSSEKVLLFEHFVRKYENAVKEIHDIHYQVSFTDEAKSLLLQA
QYPRNIRQFRDVINFSIDAAAPLISDIQSEKNITTIVEAKHIPFESFEFKQTEPPAPLGK
KHGLNKTAKEMIQNYHAKGLGPRKIATALKEKGYAIEYYQVAYYLKKQKK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaacctaaccagagatagcctatttaccgacaaattaatggaaggaattttagacgat
gcaaatgacggcatcaatgtcgtcgatgaaaatggcatcctcctctactccaatcgaatg
tctgccgtttatgccaatacaaccaccgataaaatgctcgggaaacccattaccgatttc
tattcggaagcagttttgcttaccgtactggaaacaaaaaaagcgatccgaggacaagaa
atccattatgtcgacaataaaaaatatgtggtcagctcctatcctctgatcaaagacggt
gtctttgtcggtgcatattccatcttcaaagatgttcgtgacattgaggaactgaaccga
aaaatcactttattggaactccacctggcactcaatacatccgaagaagatattctagat
attattggcaatagcggcagtttaatgactgtcttgcgaaaggccaagcgcaccgttgga
tcccttggcggacccagacactccattattaccggagaatctggaacaggaaaaaccatg
ctggccaacctcatttacaactatgccaagcaagtgggtgtaatcgaccaagatgctccc
tttattgaaatcaactgtgctcagttcacaaacccagatatcgcagccgtagaaattttt
ggcagcgaggcgggcgcctacacagggtcgcgccaaatgaagggactctttgaaaaagcc
aatggcggcatcctttttctcgatgaagcccatgccttggaacaataccaaaacatttta
ctgaaagccgtggaatccggtaccatccgccgcatcggcggtaccaaggaaatcaaggtt
gatgttattattattgcagcatccaccaaaaatctttctcaacaattgctgccggaactc
taccaacgtctggcccaatacgcgcttcatcttccatcattaagcgaaagagactcatca
gaaaaagtattgctttttgaacactttgttcgaaaatatgaaaatgccgtcaaggaaatt
cacgacatccactatcaggtttcctttaccgatgaagccaaaagcctgctgcttcaggct
cagtatccacgaaatattcggcagtttcgtgatgtcatcaacttcagtattgatgcagcc
gcacccttaatatcggacatccaatcagaaaaaaatattaccaccattgttgaagccaag
catattcccttcgaaagttttgaattcaagcaaaccgaaccccctgctcctctaggaaaa
aagcacggcttaaacaaaacagccaaagagatgatccaaaactatcatgcaaaaggattg
ggaccacgaaagattgccaccgctttgaaggaaaaaggctacgcgattgaatattaccag
gtcgcctattatctaaagaagcaaaagaaataa
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