Gottschalkiaceae bacterium SANA: SANA_31020
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Entry
SANA_31020 CDS
T10478
Symbol
dagR
Name
(GenBank) transcriptional regulator DagR
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
gbx Gottschalkiaceae bacterium SANA
Brite
KEGG Orthology (KO) [BR:
gbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gbx03000
]
SANA_31020 (dagR)
Transcription factors [BR:
gbx03000
]
Prokaryotic type
Helix-turn-helix
Other families
SANA_31020 (dagR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
AAA_5
AAA
Sigma54_activ_2
Mg_chelatase
RuvB_N
AAA_22
AAA_2
DGKD_4H
AAA_14
AF_2299-like_N
NACHT
AAA_16
HTH_11
DUF1297
Motif
Other DBs
NCBI-ProteinID:
BES66663
UniProt:
A0AA48LH77
LinkDB
All DBs
Position
3301426..3304251
Genome browser
AA seq
941 aa
AA seq
DB search
MKRLEKIHLSVIQYTKSISNQLIDSPHELGITAEVISEKLAIKRNAVSQDLNALHRNGQL
IKIKTRPVLFLDFTILKEQYHFAPTNLLFASYENFHDSIVTPTIASMHHDDPFNEMIGAR
GSLCESISKAKAAVLYPPNGLHVLMTGPSGVGKTKFAEFMHAFASQNLTDRTEVPFVYFN
CAEYYNNPELLTAQLFGYKKGAFTGAVSDRDGLIKKADGGFLFLDEIHRLTAEGQEKLFT
LLDKGVFQKLGSSHEYESASIRFIGATTEDLNHEFLRTFLRRIQVVLPLPALADRPAKER
LEIICHFLLQESIKIKKPVWITKSLMQDFMSRPLEGNIGELKSDIQFICAQAFMNALTGN
RETVLLDDRFQTGQDTRLSNKAKQLLEKLYQQTMKIEINESVLQAIGQTPSTMPESHLSN
FYELLMKEYEGLKSQGLSFTETRILLENKIHTLFKYSIHADLQTPAVSHSNELAISKKVD
RILTKIEEELDTAVPATLRDNFYLHIYSFLSYNKRGITPPIYNNISFSSQKMNQSAIYIG
EFMSQELSVAIPKGELVFLSLFMNSILEKKPQQSPLKKRKIVLVSHGNSTASSMAEFANA
LFETNLILAIDMPINQTVSETLRQTTALVAEQTIDELILCVDMGSLAHFGQVIYNKFQIP
VLTFQYITTAALLTLVQHESYDSLSLSELDETMKNFPGLTSTLQATEIRNGNTQRVLYTS
CITGIGTAEKIKQLIESTFQELWPEDLIVKAMEYHAIQTEEKILASLQKHESLVGIVGTF
QINTLTVPFISLEELFSDHGIELLMTLLEIKDPQQKTTGIKSRFVSNLSLQSVIEYLTVL
NPQLILEETELCLDQLCQELHWEIANQIRLRFLIHSSCMVERIVVNKSSYSYTLSPKTLQ
KYNHEFSVIKSAFSLIEKKYHIDLPDSEIACILELLTGRAL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattggaaaagattcatctttctgtcatacaatacacaaaatcaatcagcaat
cagctgattgattcgccacacgaactcggcataacagccgaagtgatctctgaaaaatta
gctatcaaacgaaatgccgttagccaagacctcaatgccttgcatcgaaacggacaactt
ataaaaattaaaacaagacctgttttatttcttgatttcacaatccttaaagaacaatac
catttcgctccaaccaatctcctttttgcttcctacgagaactttcacgactccatcgtc
actcctacaatagcgtccatgcaccatgacgatcctttcaatgagatgattggcgcaaga
ggaagcctatgtgaaagtatctccaaggcaaaagccgccgttttatatccacccaatgga
ctccatgttttaatgaccggtccatccggtgtggggaaaacaaaatttgctgaatttatg
cacgccttcgcttcacaaaatctcaccgaccgcaccgaggtgccttttgtatactttaat
tgtgcagaatactacaataatcctgagcttttaacagcccagctattcggatacaaaaaa
ggggctttcaccggcgctgtctcagatcgggatggcttgatcaaaaaagcagacggtggc
tttctttttcttgatgaaattcaccgcttaaccgccgaggggcaagaaaaactctttacc
ctgctcgataagggcgtctttcaaaaacttggcagcagccatgaatatgaatctgcatcc
atccgctttatcggcgcaacaacagaagatctgaatcatgaattcttacgaacctttcta
agaagaatccaggtcgtactaccacttccagccttggcagaccgtccagccaaggaacgc
ctagaaatcatctgccatttccttctacaagaaagtatcaaaatcaagaagccggtttgg
atcacaaaatcccttatgcaagattttatgtcccgtccactagaaggaaatatcggtgaa
ttaaaaagcgacattcaatttatctgtgcccaagcctttatgaatgccctcactggcaat
cgagagaccgttctcttagacgatcgttttcaaaccggacaggacacacgcctatcaaac
aaagcaaaacaattgctggaaaaactatatcaacaaaccatgaaaatcgaaatcaatgaa
tctgtccttcaggccatcggacaaaccccatccaccatgccagaatcgcatttatcgaac
ttctatgaactattgatgaaggaatacgagggcttgaaatcccaaggattgtcctttaca
gaaacacgcattcttttggagaataaaatccatactctcttcaagtattcaatccatgcc
gacttgcaaacgccagccgtttcacattctaatgaattggcaatctcaaaaaaagtcgat
cgaatccttacaaagatagaagaagaattggatacagcggtgcctgcgaccctaagggat
aatttctaccttcatatttactccttcttatcctacaacaagcgcggcattacaccaccc
atttacaacaacatttccttttctagccaaaagatgaaccaatctgccatttatatcggt
gaatttatgagccaagaactaagcgttgccattcccaagggagaactggtttttctttct
ctctttatgaattcaattctggaaaagaaaccgcaacagtcacccttgaaaaaacgaaaa
attgtccttgtttctcacggcaattcaacagcaagcagtatggcggagtttgccaacgcc
ttatttgaaaccaatctcatccttgccatcgacatgcccatcaatcaaaccgttagtgag
acccttcgtcaaacgaccgcccttgttgcggaacaaaccattgatgagctgattctatgt
gtcgatatgggctccctagctcattttggccaagtgatctacaataaatttcaaattccc
gtactgacctttcagtacatcacaacagcagcacttttgactctggttcagcatgagtcc
tatgattccctaagtctttcagagcttgatgaaaccatgaaaaactttccaggactgacc
agcaccctacaggcaaccgagatcagaaatggaaatacacagcgggttttatacacctcc
tgcatcacaggcattggaacagccgaaaaaatcaaacaattgatcgaatcaacctttcaa
gaactctggcccgaagatttaattgttaaggccatggagtaccatgccattcaaaccgag
gaaaagattcttgccagtcttcagaaacatgaaagtctggttggaatcgtggggaccttc
caaatcaacaccctcactgtcccctttatttctctagaagaactcttttcggatcacggc
attgaactgctgatgactctcttagaaatcaaggatccgcaacaaaaaaccaccggtata
aaatcacgctttgtctccaatctttccttgcagagcgtgattgaatacctaacagtattg
aatccgcaattaatcttagaagaaaccgagctttgtctggatcaactttgccaagaactg
cattgggagattgccaatcaaattcgattgcgttttcttatccacagttcctgcatggta
gaacggattgttgtgaataagtcctcctattcgtacacactatcccctaagaccttacag
aaatacaatcacgaattttctgtcataaaatcagcattctccttgatcgaaaaaaaatat
cacatcgacttacccgatagtgaaattgcctgtattcttgagcttttaactggaagagca
ctctag
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