Geobacter benzoatilyticus: JZM60_02235
Help
Entry
JZM60_02235 CDS
T07995
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
gbz
Geobacter benzoatilyticus
Pathway
gbz02024
Quorum sensing
gbz03060
Protein export
gbz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JZM60_02235 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JZM60_02235 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JZM60_02235 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gbz02044
]
JZM60_02235 (ffh)
Enzymes [BR:
gbz01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JZM60_02235 (ffh)
Secretion system [BR:
gbz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JZM60_02235 (ffh)
Eukaryotic Sec-SRP protein
JZM60_02235 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_33
AAA_17
AAA_24
AAA_16
TctA
6PF2K
AAA_18
ATP_bind_1
AAA_30
ParBc
AAA_5
Thymidylate_kin
Apc15p
RMI1_C
Motif
Other DBs
NCBI-ProteinID:
QSV46126
LinkDB
All DBs
Position
complement(498976..500334)
Genome browser
AA seq
452 aa
AA seq
DB search
MFENLSDKLDSLFKKLRGQGVMTEENIKEALREVRLVLLEADVNFKVVKDFVEKVRERAV
GTQVLQSLSPGQQVIKVVQEELVALMGGSEDNSLDLAAKPPVAIMMVGLQGSGKTTTCGK
LARLLKGQRRRPLLVPADVYRPAAIEQLKTLGRQLSVETFDSRADQDPVDICREALRYAT
LNGFDTVILDTAGRLQIDEYLMNELVRIKEAADPREILFVADAMTGQEAVNVATGFNERL
DITGVVLTKLDGDAKGGAALSIRAVTGKPVKLVGLGEKLDALEVFYPDRLVSRILGMGDI
LTLVEKAQATFDVTETERLQQKLKKSQFDLEDFKSQLQQIKKMGSLDSILGMIPGVGKAM
KQMQGAQPSEKELKRIEAIIDSMTPGERANHQIINGSRRLRIAKGSGTTVQEVNQLLKRF
TEAQKVMKQLQKMGPKGLMRGMKGMGKGMFPF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaacctttcagacaaactcgacagcctctttaaaaagctccgcggtcagggg
gtaatgaccgaggaaaacatcaaggaggcgctccgcgaagtgcgtttggtccttcttgag
gccgatgtcaacttcaaggtcgtcaaggatttcgtcgaaaaggttcgtgagcgggccgtc
ggcacccaggttctgcagagcctctcccctgggcagcaggtcatcaaggttgtgcaggaa
gaactcgttgccctcatggggggcagcgaagacaacagtcttgatcttgcagcgaagccg
ccggttgctatcatgatggtcggcctccagggctccggcaaaaccactacctgcggaaag
cttgcacggctcctcaaggggcaacgccgccgaccgttgcttgtgccagccgatgtctat
cggccggccgccatcgagcagctcaagacccttggccgccagctttcggtggagaccttt
gattcgcgggccgatcaggacccggttgatatctgccgcgaagctctccgctatgccacg
cttaatggcttcgatacggtgattctcgacaccgccggccgccttcagatcgacgagtat
ctcatgaatgagctcgtccggatcaaggaagcggccgatccacgggaaatcctgtttgtt
gccgacgccatgaccggccaggaagcggtcaatgttgccaccggcttcaatgagcggctc
gatataacgggggtggtcctcaccaagcttgacggcgatgcgaaggggggggcggccctc
tccattcgtgccgttaccggcaagccggttaaactggttggcctcggcgagaagctggat
gcccttgaggttttttacccggaccgtctggtttcccgcattcttgggatgggcgatatt
ctcacccttgtggagaaggcccaggccacctttgatgtcactgagacggagcggcttcag
cagaagctcaagaagagccagtttgatctggaagatttcaagagccagcttcagcagatc
aagaaaatggggtctctcgactcgattctcggcatgatccccggcgtggggaaggccatg
aagcagatgcagggggcccagccttcggagaaggagctcaagcggatcgaggcaattatc
gattccatgacccccggtgagcgggctaaccaccagatcatcaacggcagccgacgcctg
aggatagccaaggggagcggtacgacggttcaggaggtgaaccagcttctgaaaaggttc
actgaggcccaaaaggtgatgaagcaacttcagaagatggggcccaaagggttgatgcgc
ggcatgaaggggatgggcaaggggatgttccccttctga
DBGET
integrated database retrieval system
