KEGG   Geobacter benzoatilyticus: JZM60_03260
Entry
JZM60_03260       CDS       T07995                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
gbz  Geobacter benzoatilyticus
Pathway
gbz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gbz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JZM60_03260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gbz03019]
    JZM60_03260
Enzymes [BR:gbz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     JZM60_03260
Messenger RNA biogenesis [BR:gbz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     JZM60_03260
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Utp25_C AAA_22 CMS1
Other DBs
NCBI-ProteinID: QSV46311
UniProt: A0ABX7Q5C9
LinkDB
Position
688335..689651
AA seq 438 aa
MKFSDLHLPEEVQRGIADTGFTDCTPIQEKTLPLALAGKDVAGQAQTGTGKTAAFLISLF
TRLLNNPKGGETRNPRALILAPTRELVVQIEKDAQALGAHCDLVIQAIYGGVDYMKQRSA
LKEGADVVVGTPGRLIDYLKQKVYSLKEIEVLVIDEADRMFDMGFIADLRFILRRLPPFD
KRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQILYHVGRKEKFPLLLGL
LRTKVMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLRILEDFKSGKLPIL
IATDVASRGLHIDGVSHVVNYDLPQDPEDYVHRIGRTARAGAEGKAISMADEDGAFHLEA
IHEYIKDKIPVEWPEDDLFVHDFKRVKPKPKGHETRAKGPTHHGRKHPEGEKKEGEGEAK
KRRRRPRKKPAGDAPKAD
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgaaattcagcgacttgcacctccccgaggaggtgcagcggggcattgccgacaccggc
ttcaccgactgcaccccgatccaggaaaaaacccttcccctggcccttgcgggcaaggat
gtggccggccaggcccaaaccggcaccggcaaaaccgcagcattcctcatcagcctcttc
acccgcctcctcaacaatcccaaaggcggggaaacccgcaacccgcgggccctgatcctc
gccccgacaagggaactcgtcgtccagatcgagaaggacgcccaggccctgggcgcccac
tgcgacttggttatccaggccatctacggcggcgtcgactacatgaagcagcgcagcgcc
ctgaaggaaggggccgacgtggtggtaggcacgccgggacgcctcatcgactacctcaag
cagaaggtttactccctcaaggagatcgaggtcctcgtcatcgacgaggcggaccggatg
ttcgacatggggttcatcgccgatctccgcttcatcctccggcggcttccccccttcgac
aagcggcagaatctcatgttctccgccaccttgaaccagcgggtcatggagcttgcctac
gagttcatgaacgtccccgaaaaggtggctgtcacccccgagcagatgaccgccgagagg
gtggagcagattctctaccacgtggggcgcaaggagaaatttccgctgcttctgggcctt
ctgcgcacgaaggtgatggaacggaccatgatcttcgtcaacaccaagcgggaggcggaa
ttcctggacgagcggctcaacgccaacgactttccctgccgggtcatctccggcgacgtg
gagcagagaaagcgcctcagaatcctggaggatttcaagagcggcaaactcccgatcctc
atcgccaccgacgtggcctcccgggggctccacatcgacggggtctcccacgtggtaaac
tacgaccttccccaggacccggaagactacgttcaccgcatcggccgtaccgccagggcc
ggagcggaggggaaagccatctccatggccgacgaggacggcgccttccacctggaggca
atccacgagtacataaaagacaagataccggttgaatggcctgaggacgacctcttcgtc
cacgacttcaagcgggtgaagcccaagcccaagggacacgagacccgggccaaggggccg
acccaccacggacgtaaacacccggaaggggaaaagaaggaaggtgaaggggaggcgaag
aagcgccggcggcggccacggaagaagccggcgggagatgcgccgaaggcagattga

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