Geobacter benzoatilyticus: JZM60_03815
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Entry
JZM60_03815 CDS
T07995
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gbz
Geobacter benzoatilyticus
Pathway
gbz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JZM60_03815 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbz03019
]
JZM60_03815 (pcnB)
Enzymes [BR:
gbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JZM60_03815 (pcnB)
Messenger RNA biogenesis [BR:
gbz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JZM60_03815 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QSV46416
LinkDB
All DBs
Position
complement(805030..806382)
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AA seq
450 aa
AA seq
DB search
MKSEPVIIPRQDHPISRSQVSPNALRVLYRLKDNGHIAYLVGGCVRDLLLGREPKDFDVA
TDATPNQVKRLFRNCRLVGRRFRLAHIHYQDEIIEVATFRAMAPEEPGEAEAEPLAEGEV
ERSRKPRHVVSDEGMVLRDNVFGTPEEDALRRDFTVNALAYNIADFSIIDYANGMEDLRR
GVIRTIGDPVVRFTEDPVRMIRAVRFAAILGFTVEEATRRAVLELAPTITRATAPRLYEE
MLKLFLSGAGERVYQILRQAGLFAHLFPRFNGWLDRESDGFPHLRISKALEWIDGQVGGG
EPVSPPLLLALMFGEYVEELAGELVSAGMPVPDAVSGAMAGFLGEQAPIIAIPHRIALAV
REILLLQLRLAKIPGKRPQGVLARSSFAEALAYLRCRCAVTGEGEKVLAWWERYSRDNTM
PPVEPGTGESEGKATKRRRRRGKRRKPAVS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgaaccagtcatcatcccccggcaagatcatcccatctcacgctcccaagtc
agccccaacgccctccgtgtcctctaccgcctcaaggacaacggccatatcgcctacctc
gtggggggatgcgtccgggatctcctcctggggcgcgaacccaaggatttcgacgtggcc
accgacgccacccctaaccaggtgaagcgcctcttccgcaactgccgcctggtggggcgc
cggttccggcttgcccatatccattatcaggacgagatcatcgaggtggccaccttccgg
gccatggcgccggaagagccgggggaggccgaagccgaacctctcgccgaaggggaggtg
gagcgctcccggaagccccgccatgtggtgagcgacgaggggatggtgctgcgggacaat
gtcttcggaacgccggaggaagatgccctgcggcgggattttacggtgaatgccctggcg
tacaatatcgccgatttttccatcatagactacgccaatggcatggaggacctgcggcgt
ggagtcatccgcaccattggcgatcctgtggttcgtttcaccgaggacccggtacggatg
atccgggcagtgcgctttgccgccatcctgggctttaccgtggaggaggctacccggcgg
gcggtcctggagctggcgcccaccattaccagggccacggctccccgtctctacgaagaa
atgttgaagctgtttctctcgggggccggggagcgggtctaccagattctgcgccaggcc
gggctctttgcccatcttttcccccggttcaacggctggcttgaccgggagagcgacggt
tttccccatttgaggataagcaaggctctggagtggattgacggccaggtggggggcgga
gagccggtttcgccgccgcttcttcttgccttgatgttcggcgagtatgtggaggaactg
gccggggaactggtttcggccgggatgccggttcctgatgcggtcagcggcgccatggcc
ggctttctcggtgagcaggcgccgattatcgccatcccccatcggattgccctcgccgtg
cgggaaattctgctgctccagcttcgtctggcaaagataccggggaaacggccccagggg
gttcttgcccggtcaagctttgccgaggccctggcctatctgcgatgccggtgcgcggtg
acgggggagggggagaaggtccttgcctggtgggagcgctacagccgcgacaacaccatg
ccgccggtggagccgggtaccggggaaagcgaaggaaaagccacgaaacgccgcaggcgc
cgggggaagagacgcaagccagctgtctcctga
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