Geobacter benzoatilyticus: JZM60_03920
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Entry
JZM60_03920 CDS
T07995
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gbz
Geobacter benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gbz03009
]
JZM60_03920 (rimO)
Enzymes [BR:
gbz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JZM60_03920 (rimO)
Ribosome biogenesis [BR:
gbz03009
]
Prokaryotic type
ribosomal protein modification factors
JZM60_03920 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QSV46436
LinkDB
All DBs
Position
complement(824502..825839)
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AA seq
445 aa
AA seq
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MKEKVSMVSLGCPKNLVDAEVMLGCLAKDQYEITTDEHEADIIIVNTCSFIGDAKKESID
TILDLADRKQDGRCKLLIVTGCLPQRYQEELAAELPEVDIFIGTADYPRIAGIIAEKRGV
AEQLRYISDPNYIFDESLPRLKSSPAYTAYLKIAEGCSNCCSYCVIPSLRGALRSRPMDN
LLMEARTLVSNGAREINLIAQDITAWGRDLPGSPTLEELIRELAKIAGLRWIRLLYAYPD
GITDGLIEIIKNEPKVCKYLDIPIQHISDPILKRMNRRSTEPQIRELISRLRSEIPEIAL
RTSIIVGFPGETDEDFRTLLHYVEETQFDRLGVFCYSREEGTPAAGMEDQVSERVKRDRY
KKLMKVQARLSFKRNRRLIDTEEEVIVEGYSDETDLLLKGRSSRQAPDIDGQVYITAGNA
NVGDIVRLRITDSSDYDLIGEIVEE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaaagtaagcatggtcagcctcggctgccccaagaacctggtggacgccgag
gtgatgctcggctgcctggcgaaggaccagtacgagattaccaccgacgaacacgaggcc
gacatcatcatcgtcaatacctgctccttcatcggtgatgcaaagaaagagagcatcgac
acgattctcgatctggccgaccgcaagcaagacggccggtgcaaactcctcatcgtcacg
ggctgccttccccagcgctatcaggaggaactggcggcggaactccccgaagtggacatc
tttatcgggaccgccgactacccgcgcattgccgggataatcgccgaaaagcgcggcgtg
gcggaacagctccgctacatcagcgaccccaattacattttcgacgagagcctgccgcgg
ctgaaatcgtcgccggcctacaccgcctatctgaagattgccgaggggtgctccaactgc
tgctcctactgcgtcatcccgtcgctgcggggggctttgcgctcgcgcccgatggacaac
ctcctcatggaggcccggaccctcgtatccaatggcgccagggagatcaacctcattgcc
caggatatcaccgcctgggggcgcgatctgccgggaagcccgactctggaggagctcatc
cgcgagctggcgaagattgcggggcttcggtggatcaggctcctctacgcctaccccgac
gggattaccgacggcctcatcgagatcatcaagaacgagccgaaggtctgcaagtacctt
gatataccgatccagcatatcagcgatccgatcctgaaacggatgaaccgccggagcact
gagccccagatccgggagctcatttcgcggctgaggagtgaaatccccgaaatagctcta
cgcacttcgataatcgtcggctttcccggtgaaaccgacgaagatttccgcaccctgctc
cactatgtggaggagacccagttcgaccgcctcggcgtattctgctattcccgggaggaa
gggacccctgccgccgggatggaagaccaggtgtccgagcgggtcaagcgggaccgctac
aaaaagctcatgaaagtccaggcccgcctctccttcaaacgcaaccgccgcctcatcgat
accgaggaggaggtaatcgttgagggttacagcgacgagaccgacctgctcctcaagggg
cgctcgtcccggcaggctcccgacatcgacgggcaggtatacattaccgccggcaatgcc
aacgtgggggatattgtgcggctgcggatcaccgattcatccgattatgacctcatcggg
gaaattgttgaggaatga
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