Geobacter benzoatilyticus: JZM60_05485
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Entry
JZM60_05485 CDS
T07995
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gbz
Geobacter benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gbz03032
]
JZM60_05485 (gyrB)
03400 DNA repair and recombination proteins [BR:
gbz03400
]
JZM60_05485 (gyrB)
Enzymes [BR:
gbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JZM60_05485 (gyrB)
DNA replication proteins [BR:
gbz03032
]
Prokaryotic type
DNA Topoisomerases
JZM60_05485 (gyrB)
DNA repair and recombination proteins [BR:
gbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JZM60_05485 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QSV46725
UniProt:
A0ABX7Q6W7
LinkDB
All DBs
Position
1149743..1152130
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AA seq
795 aa
AA seq
DB search
MADELNNDYGADKIKVLEGLEAVRKRPAMYIGSTSSQGLHHLVYEIVDNSIDEALAGYCN
EVNVTIHMDGSITVVDNGRGIPTEMHPTEGKPAAEVALTVLHAGGKFDNTSYKVSGGLHG
VGVSVVNALSKKLELGIRRDGKVFQQFYAFGAPLTPLEIVGETKKRGTRITFLPDDTIFE
TTEFSFDVLSQRLRELAFLNAGVRITITDEREEGKHHDFHYEGGIVSFVEYLNRNRTALH
PKPVYFRGEKAGIDMEIAFQYNDSYDEKVFTFANNINTHEGGTHLVGFRAALTRSMNSYA
AANELMKKEKVSISGEDLREGLTAVISVKIPQPQFEGQTKTKLGNSEVKGYVESLMNEQL
AVFLEENPKIAKDIIGKSIEAARAREAARKARELTRRKGALDISNLPGKLADCQERDPSL
CELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVEKARFDKMLSSQEIGTLITALGTG
IGKEDFDVAKLRYHRIIVMTDADVDGSHILTLLLTFFFRQMPEVVERGHLYIAQPPLYKV
KRGRKELYLRNEAAMQAYLLEEGTEDMVLFLENGEKTYSGKQIIPILKQLVEYRTILDKV
VRKGINEELIRVLLRLGVKAGIEDMEQLVPFLANISRVYDGGDFSPLDDGRVIVRLGNLR
IALDQHTLDLIGSYEYGLLVESFRKVREMFGEGSAVVSSEGKELFTTTIGLDLLSFFMDS
AKKGLSIQRYKGLGEMNPDQLWETTMNPENRTLLQVKIEDAIEADTIFTILMGDQVEPRR
DFIEQNALNVSNLDI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaactgaacaacgattacggagcggacaagatcaaggtccttgaggggctc
gaagctgttcgcaagcgccccgccatgtacatcggctcgacttcgagccaggggctccac
cacctggtttacgagatcgtcgacaactccatcgacgaggccctggccggttactgcaac
gaggtgaacgtcaccatccatatggacggctccattacggtggtggacaacggacgtggt
attcccaccgagatgcatccaactgaagggaaaccggcggcggaggtggcccttacggtt
ctccatgccggcggcaagttcgataacacgtcctacaaggtgtccggcggtctccacggc
gtcggcgtttcggttgttaacgccctgtcgaaaaagcttgaactgggaattcgccgggac
gggaaggtgttccagcagttctacgccttcggtgcgccgctgactcccctggagatcgtt
ggggagaccaagaagcgggggaccaggatcactttcctccccgacgacaccatcttcgag
accacggaattctccttcgatgtcctttcccagcgtctgcgggagttggccttcctgaat
gccggagtgcggatcaccattaccgacgagcgggaagagggaaaacaccacgactttcac
tacgaggggggtattgtctccttcgtggagtacctgaaccggaaccgtaccgcgctccac
ccgaaaccggtctacttccggggggagaaggccggcatcgacatggagatcgccttccag
tacaacgactcctacgacgagaaggttttcacctttgccaacaacatcaacacccacgag
ggtggtacccaccttgtggggttccgggcggcgctgacccgctccatgaactcctacgcc
gcggccaacgagctcatgaagaaggagaaggtatccatctccggcgaagacctgcgggag
gggctcacggcggtcatatccgtgaagataccccagccccagttcgaggggcagaccaaa
accaagctcggcaactccgaggtgaagggatacgtggaatccctcatgaacgagcagctg
gcggttttcctggaagagaaccccaagatcgccaaggacatcatcggcaagtccatcgag
gcggcccgggcccgggaagcggctcgcaaggccagggaactgacccggcgcaaaggcgcc
ctcgacatctccaacctccccggcaagctggccgactgccaggagcgggacccgtcgctc
tgcgagctgtatctcgtcgagggtgattccgccggcggctccgccaagcaggggcgcgac
cggaaattccaggcgattctccccttgaagggtaagatcctcaacgtggagaaggcccgc
tttgacaagatgctctcttcccaggagatcggtaccctcatcacggccctggggaccggc
atcggcaaggaagacttcgacgtggccaagctccgctaccaccggatcatcgtcatgacc
gatgccgacgtggacggttcccacatcctgacgctcctcctcaccttcttcttccggcaa
atgcccgaagtggtggagcgcgggcatctctacatcgcccagccgccgctctacaaggtg
aagcggggtcgcaaggagctctatctccgcaacgaggcggccatgcaggcctatctcctg
gaggaggggaccgaagacatggtcctcttcctggagaacggcgagaagacctacagcggc
aagcagataatcccgattctcaagcagctggtggagtatcgcaccatcctggacaaggtg
gtacgcaaggggatcaacgaggaactgatccgggtgctgctccgtctgggagtaaaggcc
ggcatcgaggacatggagcagctggtgccgttcctggcgaatatatcccgggtctacgac
ggcggcgacttcagccccctggatgacgggcgggtcatcgtgcgcctcggcaatctcagg
atagccctggatcagcataccctcgaccttatcggctcctacgagtacggtctccttgtt
gaaagtttccggaaggtgcgggaaatgttcggcgaaggcagcgccgtggtttccagcgag
gggaaagagctcttcacaaccaccatcggactcgatctcctctccttcttcatggacagc
gccaagaaggggctctccatccagcgctacaagggcctcggcgagatgaacccggatcag
ctctgggagacgaccatgaacccggagaaccggacactgctccaggtgaagatagaggat
gccatagaggccgacacaatattcaccatactcatgggcgaccaggtggagccccgccgg
gacttcatcgagcagaacgccctgaacgtgtcgaatctggatatatag
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integrated database retrieval system
