Geobacter benzoatilyticus: JZM60_06570
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Entry
JZM60_06570 CDS
T07995
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gbz
Geobacter benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gbz03016
]
JZM60_06570
Enzymes [BR:
gbz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JZM60_06570
Transfer RNA biogenesis [BR:
gbz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JZM60_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QSV46924
LinkDB
All DBs
Position
1395848..1396996
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AA seq
382 aa
AA seq
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MPVQPVSPEIITTPDGVRRLADRLSREPYVACDLEADSMHHYQEKVCLIQFAVPGFAAIV
DPLAVADMAPLAPLFADAAICKVFHGADYDIRSLHRDFGIEVNNLFDTMIACQFLGEREF
GLAAALKKRFGVDLDKQYQRADWSRRPLSAGMIEYAVKDTTLLIELAGQLEAELREKGRF
GWFEEECAILARVRVAQRSGSDPMFLRFKGASRMAPRSLAVLEEILRFRDRRARQMDVPP
FKVLGTETVRELAEKKPRSAADFAGITGMTERVLERCGEEILRAVEKGIALPEQELPVFP
REERRKVGGDEERRVKALKGWREGKSRQFGVEPGFLANNALLEQIALSFPRSEEELDGVA
GVRSWQRREFGAELVAALQVRR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgttcaacccgtttcacccgagatcatcaccacccccgacggggtccgccgcctt
gcggaccgcctttccagggagccctatgtggcctgcgacctggaggccgactccatgcac
cactaccaggagaaggtctgcctgatccagttcgcagtgccggggttcgccgcaatcgtc
gatccgctggccgttgcggatatggctcccctggcgccgctcttcgccgatgccgccatt
tgcaaggtattccacggggccgactatgacatccgctccctccatcgggatttcggcatc
gaggtgaacaacctcttcgataccatgattgcgtgccagttcctcggcgagcgggagttc
ggcctggcggcggcgctcaagaagcgcttcggcgtcgatctggataagcagtaccagcgg
gccgactggagccggcgcccgttgtcggcagggatgatcgagtatgcggtgaaggatacg
acgctcctcatcgagcttgccgggcaacttgaggcagagctcagggagaaaggacgtttc
ggatggtttgaggaagagtgtgccattctggcgcgggtgcgggtggcgcagcgctccggc
tccgatccgatgtttctccgcttcaaaggggcgtcgcggatggctccccggtccctggcg
gttctggaggagattctccgcttccgggaccggcgggcgcggcagatggatgtccccccc
ttcaaggtgctcggcaccgaaacggtgcgggagctggccgagaagaagccccggtccgct
gcggattttgcgggcattaccggaatgactgagcgggttctggaacggtgcggtgaggag
atactgcgggccgtggagaagggtattgcgcttccggagcaggagctccccgtgtttccc
agggaggagcggcgcaaagtggggggggacgaggagcggcgcgtcaaggccctcaaggga
tggcgcgaggggaaatcccggcagttcggggtagagcccggctttctggcaaacaatgcc
ctgcttgagcagatcgccctgagttttccccgttccgaggaggagcttgacggtgtcgcc
ggagtccgctcgtggcaaagacgggaattcggcgccgagcttgtggcggcccttcaggtc
aggcgctag
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