Geobacter benzoatilyticus: JZM60_08895
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Entry
JZM60_08895 CDS
T07995
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gbz
Geobacter benzoatilyticus
Pathway
gbz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JZM60_08895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gbz03021
]
JZM60_08895
03400 DNA repair and recombination proteins [BR:
gbz03400
]
JZM60_08895
Enzymes [BR:
gbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JZM60_08895
Transcription machinery [BR:
gbz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JZM60_08895
DNA repair and recombination proteins [BR:
gbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JZM60_08895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
QSV44299
UniProt:
A0ABX7PZ15
LinkDB
All DBs
Position
1884453..1885475
Genome browser
AA seq
340 aa
AA seq
DB search
MYRNWRDLISPKKLQVESESLTNTYGKFFAEPFERGFGTTLGNSLRRVLLSSLQGAAITS
VKIKGVLHEFSSIPGVTEDVTNIILNLKGVSLKMYGNESRVVRIIHKGDGIIKAGDIVSD
ANVEILNPDHHIATCSKDANLEMEMVVKLGKGYVPADRNRDEKAPVGTIPIDAIFSPIKK
VNFTVTNARVGQMTDYDKLILELWTNGSIVPEDAVAFAAKILKEQLSIFINFDEEAEPAE
EAETEEEREKINENLYRSVDELELSVRSANCLKNAGIKMIGELVSRSEAEMLKTQNFGRK
SLNEIKDILADMGLTLGMKLDGFPDPEVMRRIRGERKDEE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaaactggcgcgacctgatcagccccaaaaagcttcaggttgaaagtgaatcg
cttaccaatacatacggaaaattttttgcagaaccctttgagcgcggttttggcacgact
ctcggaaactctttgagaagagtgcttctttcgtcgcttcaaggtgcagctattacttcg
gttaaaatcaaaggcgttcttcacgagttttcttccatccctggtgttacagaggatgtt
acgaatattattcttaatctgaagggcgtcagcctcaagatgtatggcaatgagtcccgg
gtagtgagaatcattcataagggcgacgggatcatcaaggccggcgatatcgtatctgat
gccaatgtcgagattctgaaccctgatcatcatattgccacttgctccaaggacgccaat
cttgagatggaaatggtggtcaagcttggaaagggttatgtgccggcagaccgtaaccgt
gatgaaaaggcgcctgttggaactatcccgattgatgccatcttctcgcccataaagaaa
gtgaatttcaccgttacaaacgctcgtgttggtcagatgaccgactatgacaagcttata
cttgagctttggaccaatggaagcattgttcctgaggacgcggtagcttttgctgcaaag
attctgaaggaacaactcagcatcttcatcaacttcgatgaggaagcagagcctgcggaa
gaagctgagaccgaagaagagcgtgagaagataaacgagaatctttatcgttctgtggat
gagctcgagttatccgtgcgttcagctaattgcctcaagaatgccggcataaaaatgatt
ggtgagcttgtgtcccgttctgaggctgagatgctcaagacgcaaaatttcgggcgtaag
tcactgaatgagatcaaggacattctggcagacatgggacttactctcggaatgaagctt
gatggctttcctgacccggaagtcatgcgcagaatccgcggtgagcggaaagacgaagaa
taa
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