Geobacter benzoatilyticus: JZM60_08945
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Entry
JZM60_08945 CDS
T07995
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
gbz
Geobacter benzoatilyticus
Pathway
gbz00220
Arginine biosynthesis
gbz00240
Pyrimidine metabolism
gbz00250
Alanine, aspartate and glutamate metabolism
gbz01100
Metabolic pathways
gbz01110
Biosynthesis of secondary metabolites
gbz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JZM60_08945 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JZM60_08945 (carB)
00220 Arginine biosynthesis
JZM60_08945 (carB)
Enzymes [BR:
gbz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JZM60_08945 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
ATP-grasp
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
ATP-grasp_5
ATP-grasp_3
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
QSV44308
UniProt:
A0ABX7PYU2
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All DBs
Position
complement(1894086..1897286)
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AA seq
1066 aa
AA seq
DB search
MPRRDDVKKVLIIGSGPIIIGQACEFDYSGTQACKALRKLGYQIVLVNSNPATIMTDPAM
ADATYIEPLNVETLTEIIRKERPDALLPNLGGQTGLNLSSALDRAGVLTEYGVRVIGVNL
DAIKRGEDRETFKETMTRLGIETARSEIATSIEEALDVVSRIGLPVVIRPAYTMGGTGGG
FAYNMEEFRTIAARGLAASPVSQILVEESVLGWEELELEVVRDARNQKITVCFIENVDAM
GVHTGDSYCTAPMLTITPELQARLQDYAYRIVDAIEVIGGTNVQFAHDPKTGRVVVIEIN
PRTSRSSALASKATGFPIAMVSSLLAAGLTLDEIPYWRDGSLEKYTPGGDYVVVKFARWA
FEKFKGVEDKLGTQMRAVGEVMSIGKNYKEALQKAIRSLEIGRYGLGFARDFNARSLPKL
LEMLAEPSSERQFIIYEAIRKGADIDQLHRLTHIKHWFLQQMKELVELEEEILRHRGSLP
PDELLLRAKRDGFADRYLAKLLEIPEPRIREKRLAMGLAEAWEAVPVSGVENAAYYFSTY
NAPDTVPVSDRKKIMVLGGGPNRIGQGIEFDYCCVHTAFALREAGYETIMVNCNPETVST
DYDTSDKLYFEPLTVEDVLSIYAKEKPEGVVVQFGGQTPLNIAAELEAAGVRIIGTTPET
IDLAEDRQRFARVMTELGIPQPESGMASTLDEALAVAARIGYPLMVRPSYVLGGRAMEVV
HDEEMLREYVTKAVDVSPERPILIDRFLENAIEAEADAISDGTDAFVPAVMEHIELAGVH
SGDSACVIPPVSIPQKHIATIDEYTRRIAVAMGVVGLMNIQYAIADDTVYILEANPRASR
TVPLVSKVCNIPMPRIAVQVMLGAKLKEMGLARRTFPHFGVKEAVFPFPMFPEVDPVLGP
EMRSTGEVLGLAGNYGLAFYKAQEGANAQLPLSGSVLFTIADRDKDGALAAARRFAELGF
TIRATEGTCRFLAGHGIAATPVTKLHEGRPNLVDEIKNGEIQLVVNTPAGKQSAHDDSYI
RKAAIANKIPHITTVAAAVAAAEGIAARRNGKEPVMSLQEYHAGIH
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggcgcgacgacgtcaagaaggtcctcatcatcggttccggccccatcatcatc
ggtcaggcctgcgagttcgactactccggcacccaggcctgcaaggccctgcgcaagcta
ggctaccaaatcgtgctggtgaactccaaccccgccaccatcatgaccgaccccgccatg
gccgacgccacctatatagaaccactcaacgtggaaaccctcaccgagatcatccgcaaa
gagcgccccgacgccctcctccccaacctggggggacagaccggcctcaatctctcgtcg
gccctggatcgggccggggtgctcaccgagtacggggtgcgcgtaatcggcgtgaatctc
gatgccatcaagcggggagaggaccgggaaaccttcaaggaaaccatgacgcggctcggc
atcgagaccgcccgcagcgaaattgccacctccatcgaggaggccctggacgtggtatcc
cgcatcgggctgccggtggtgatccgccccgcctacaccatgggagggaccggcggcggc
tttgcctacaacatggaggagttccggaccatcgcagcccggggcctcgcggcgagcccg
gtgagccagatcctcgtggaggagtcggtgctcggctgggaggagctggaactggaggta
gtgcgggacgccaggaaccagaagatcaccgtctgcttcatcgaaaacgtggacgccatg
ggggtccacaccggcgactcctactgcacggcccccatgctcaccataacgccggagctt
caggcccggctccaggattatgcctaccgcatcgtcgacgccatcgaagtgatcggaggc
accaacgtccagttcgcccatgatcccaaaaccgggcgggtggtggtcatcgagatcaac
ccccgcacctcccgctcctcggccctggcatccaaggccaccggctttcccatcgccatg
gtctcgtcgctcctggctgcggggctcaccctggacgaaatcccctactggcgggacggc
tctctggagaagtacaccccgggcggcgactacgtagtggtcaagttcgcccgctgggcc
ttcgagaagttcaagggggtcgaggacaagctcggcacccagatgcgggccgtgggcgag
gtcatgagcatcggcaagaactacaaggaggcgctccagaaggcgatccgctccctggag
ataggccgctacggcctcggctttgcccgggacttcaacgccagatcgctcccgaaactc
ctggagatgctggccgagccctccagcgagcgccagttcatcatctacgaggccatccgc
aagggggcggacatcgatcagctccaccggctgacccacatcaaacactggttcctgcag
cagatgaaggagctggtggaactggaggaggagatcctccggcaccggggaagcctcccc
cctgacgagctgctgctccgggctaagcgggacggctttgcggaccgctacctggcgaaa
ctgctggagatcccggagccccgaatccgcgaaaagcggctggctatgggtcttgccgag
gcgtgggaggcggtgccggtcagtggcgtggagaacgccgcctactacttctccacctac
aacgcaccggacacggtgccggtcagcgaccggaagaaaatcatggtgctggggggcggt
cccaaccggatcggccaggggatcgagttcgactactgctgcgtccacaccgcctttgcc
ctgcgggaagccggctacgagaccatcatggtcaactgcaacccggaaacggtctccacc
gactacgacacctcggacaagctctacttcgagcccctcaccgtggaggacgtcctctcc
atctacgccaaagagaaacccgagggggtggtggtccagttcggggggcagacccccctc
aacatcgccgccgaactggaggcggccggagtgcggatcatcggcaccacgccggagacc
atcgacctggccgaggatcggcagcgcttcgccagggtgatgacggagctggggataccc
cagcccgaatcggggatggccagcaccctggatgaggccctggccgttgctgcccgcatc
ggctaccccctcatggtgcgcccctcctacgtcctgggggggagggccatggaggtggtc
cacgacgaggagatgctccgggagtacgtcaccaaggcggtggacgtctcgccggagcgc
ccgatcctcatcgaccggttcctggagaacgccatcgaggccgaggccgacgccatcagc
gacgggaccgacgccttcgtgccggcggtcatggagcatatcgagctggccggggtccac
tcgggggattcggcctgcgtcatcccgccggtgagcataccccaaaagcacatcgccacc
atcgatgagtacacccgcaggatcgccgtggccatgggggtcgtggggctcatgaacatc
cagtacgccatcgccgacgacaccgtctacatcctggaggcgaacccccgggccagccgc
accgtgccgctggtctccaaggtctgcaacatccccatgccccgcatcgccgttcaggtc
atgctcggggcgaagctgaaggagatggggctcgcccgccgcaccttcccccacttcggg
gtcaaggaggcggtattccccttccccatgttcccggaggtggacccggtgctcggtccg
gagatgcgctccaccggcgaggtgctgggacttgcggggaactacggcctcgccttctac
aaggcccaggaaggggccaacgcccagctccctctctccgggtcggtcctcttcaccatt
gccgaccgggacaaggacggtgccctggcagcggcgcgccgcttcgcggaactgggcttc
accatccgggccacggaggggacctgccggttcctggccggccacggcattgccgccacc
ccggtcaccaagctccacgaagggcgccccaacctggtggacgaaatcaagaacggcgag
atccagctggtagtcaacaccccggccggcaagcagagcgcccatgacgattcctacatc
cgcaaggcagccatcgccaacaagattccccacataaccaccgtggcagccgccgtggcc
gccgccgaggggatcgcggcccgccgcaacggcaaggagccggtcatgagccttcaggag
taccacgccggtatccactga
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