Geobacter benzoatilyticus: JZM60_10120
Help
Entry
JZM60_10120 CDS
T07995
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gbz
Geobacter benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gbz03019
]
JZM60_10120
Messenger RNA biogenesis [BR:
gbz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JZM60_10120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QSV44526
LinkDB
All DBs
Position
2148523..2149677
Genome browser
AA seq
384 aa
AA seq
DB search
MNKVYVSSIKDRDQLESVFLVKDKIMAMAKNGKPYMTLKLMDKTGEIEGRVWDNVDELSA
IFERDDFIAIRCKASVYLGKMQLVISELVRVPDERVQLADFLPESDRSVAEMEQELAALL
ASFTDPHLKALMDAFFGDAELMALYRIAPAAKGMHHVYLGGLLEHSLAVARLVDVIIPLY
GGLNRDLLVAGALLHDVGKVREMTYQRSFDYTDEGKLLGHITIGVEMVQERIAAIPGFPA
ELGMLLKHMLLSHHGQYEYGSPKRPKTVEATILNYLDDLDSKINGIRTHLRKETESQSRW
SSYHRLYDRYFFKENCCSGEEYDEAAEAQAEGATLGLPVQQPAPPEPPAAPAPQPRQEES
QKKKGFHNNPFEQLQGKNLDLFNQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaggtttacgtgagcagcatcaaggaccgggaccagctggaatcggtctttctc
gttaaagacaagatcatggccatggccaaaaacggcaagccgtacatgacgctgaagctc
atggacaaaaccggcgagatcgaagggcgggtctgggacaatgtggatgagctctccgcc
atcttcgagcgggacgatttcatcgccatccgctgcaaggccagcgtctacctggggaag
atgcagctcgtcatctccgagctggtgcgggtccccgacgaacgggtgcagctggccgat
ttccttcccgagtcggaccgctccgtggccgagatggaacaggaacttgccgcgctcctg
gcgagcttcaccgatccccacctgaaggccctcatggacgcctttttcggcgacgccgaa
ctcatggccctctaccggatagcaccggccgccaagggtatgcaccacgtctacctgggg
gggctgctggagcactccctggcggtggcgcggctggttgatgtcatcatccccctctac
ggggggctaaaccgtgacctcctggtggcgggggcgctgctgcacgacgtggggaaggtg
cgggagatgacctatcagcgctccttcgattacaccgacgaggggaagcttctggggcat
atcaccatcggcgtggagatggtgcaggagcggattgccgccattccgggctttccggcg
gagctggggatgcttctcaagcacatgcttctgtcccatcacggccagtatgagtatggc
tctcccaagcggccaaagaccgtggaggccacgatccttaactacctggacgacctggat
tccaagatcaacggcatcaggacccacctccggaaagagacggaaagccagagccgctgg
agttcttaccaccggctttacgatcgctatttcttcaaggaaaactgctgctccggggaa
gaatacgacgaggcggcagaagcgcaagcagaaggagccaccctcgggttgccggttcag
cagcccgcaccgccggaaccgccggcagcaccggcgccgcagcctcggcaggaggagtct
cagaagaaaaaagggttccacaacaacccatttgagcagctccaggggaagaatctcgat
ctgttcaaccagtag
DBGET
integrated database retrieval system