KEGG   Geobacter benzoatilyticus: JZM60_10120
Entry
JZM60_10120       CDS       T07995                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gbz  Geobacter benzoatilyticus
Brite
KEGG Orthology (KO) [BR:gbz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gbz03019]
    JZM60_10120
Messenger RNA biogenesis [BR:gbz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JZM60_10120
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 HDOD Cas3_HD
Other DBs
NCBI-ProteinID: QSV44526
LinkDB
Position
2148523..2149677
AA seq 384 aa
MNKVYVSSIKDRDQLESVFLVKDKIMAMAKNGKPYMTLKLMDKTGEIEGRVWDNVDELSA
IFERDDFIAIRCKASVYLGKMQLVISELVRVPDERVQLADFLPESDRSVAEMEQELAALL
ASFTDPHLKALMDAFFGDAELMALYRIAPAAKGMHHVYLGGLLEHSLAVARLVDVIIPLY
GGLNRDLLVAGALLHDVGKVREMTYQRSFDYTDEGKLLGHITIGVEMVQERIAAIPGFPA
ELGMLLKHMLLSHHGQYEYGSPKRPKTVEATILNYLDDLDSKINGIRTHLRKETESQSRW
SSYHRLYDRYFFKENCCSGEEYDEAAEAQAEGATLGLPVQQPAPPEPPAAPAPQPRQEES
QKKKGFHNNPFEQLQGKNLDLFNQ
NT seq 1155 nt   +upstreamnt  +downstreamnt
ttgaacaaggtttacgtgagcagcatcaaggaccgggaccagctggaatcggtctttctc
gttaaagacaagatcatggccatggccaaaaacggcaagccgtacatgacgctgaagctc
atggacaaaaccggcgagatcgaagggcgggtctgggacaatgtggatgagctctccgcc
atcttcgagcgggacgatttcatcgccatccgctgcaaggccagcgtctacctggggaag
atgcagctcgtcatctccgagctggtgcgggtccccgacgaacgggtgcagctggccgat
ttccttcccgagtcggaccgctccgtggccgagatggaacaggaacttgccgcgctcctg
gcgagcttcaccgatccccacctgaaggccctcatggacgcctttttcggcgacgccgaa
ctcatggccctctaccggatagcaccggccgccaagggtatgcaccacgtctacctgggg
gggctgctggagcactccctggcggtggcgcggctggttgatgtcatcatccccctctac
ggggggctaaaccgtgacctcctggtggcgggggcgctgctgcacgacgtggggaaggtg
cgggagatgacctatcagcgctccttcgattacaccgacgaggggaagcttctggggcat
atcaccatcggcgtggagatggtgcaggagcggattgccgccattccgggctttccggcg
gagctggggatgcttctcaagcacatgcttctgtcccatcacggccagtatgagtatggc
tctcccaagcggccaaagaccgtggaggccacgatccttaactacctggacgacctggat
tccaagatcaacggcatcaggacccacctccggaaagagacggaaagccagagccgctgg
agttcttaccaccggctttacgatcgctatttcttcaaggaaaactgctgctccggggaa
gaatacgacgaggcggcagaagcgcaagcagaaggagccaccctcgggttgccggttcag
cagcccgcaccgccggaaccgccggcagcaccggcgccgcagcctcggcaggaggagtct
cagaagaaaaaagggttccacaacaacccatttgagcagctccaggggaagaatctcgat
ctgttcaaccagtag

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