Geobacter benzoatilyticus: JZM60_10455
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Entry
JZM60_10455 CDS
T07995
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
gbz
Geobacter benzoatilyticus
Brite
KEGG Orthology (KO) [BR:
gbz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gbz01002
]
JZM60_10455
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gbz01011
]
JZM60_10455
Peptidases and inhibitors [BR:
gbz01002
]
Cysteine peptidases
Family C82
JZM60_10455
Peptidoglycan biosynthesis and degradation proteins [BR:
gbz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JZM60_10455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QSV44588
LinkDB
All DBs
Position
complement(2228493..2230169)
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AA seq
558 aa
AA seq
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MGRTMGLRGLFFNLAVFACCLAFFLPAGYGWELADEVRGHLRIRVDSADTATQLVVAGEL
ILAPESVAGFYKNRAFRPAWMNGKTPSPLADALVAALKQADDEGLDPRNYHLERLEAMLA
EAWRQPLRPAMLANLDIILTDAYLLYASHLFSGQVSPETLGTEWYLRRPDADLTAILRKA
LKSGNIEESLNSLLPADPGYGRLKEALRHYREIRASGGWPAISEGPMLRLGDTGPRVTEL
RARLAAGGDVVSGIAEVEGVFDEEVEQAVIRFQQSHGLDADGAVGEQTLAALNVPAEERE
KQILVNLERLRWLPADLGNRHIMVNVAGFSLHVIEGGETLTGMRAIVGRPYRQTPSFSGK
LTHLVFSPYWHIPHSIAVKDLLPKIQKDRRFLAREKIRVFRGRGKAERPVNPTKIKWQQL
SENNFPYHLRQDPGPLNSLGRVKFMLPNSFNVYIHDTPSRELFEKAVRGFSSGCIRIDSP
VELAEYLLRDDPAWTTETILEAMEQPRERTVRLPRPIPVHFLYMTAWVDTEGVLQFRDDI
YSRDTLVADALEAAPPSR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggggagaactatgggtctgaggggattgttcttcaatctcgctgtttttgcttgctgc
ctcgcgttttttctccctgcgggatacggctgggagctggccgatgaggtgcgcggacac
ttgagaattcgcgtcgactcggccgacaccgcaacacaactggtggtggccggggagctt
atcctcgcccccgaatccgttgccggattctataaaaaccgggctttccggcccgcctgg
atgaacggcaaaaccccttctccccttgccgatgccctggtggctgcccttaagcaggct
gacgacgaggggctcgatccccgcaattaccacctggaacggctcgaagcgatgcttgcc
gaagcatggcggcagccacttcgaccggcgatgctggcaaatctggacattatcctcacc
gacgcctacctcctctacgcatcccatctcttttcgggccaggttagcccggaaaccctc
ggcaccgaatggtacctgcgccgccccgacgcggacctgactgctatcctccgaaaagcg
ctcaaatccggcaacattgaagaaagtctcaactctcttctccccgcagaccccggctat
ggccgattgaaagaggctcttcggcactaccgcgaaatccgcgcaagcggcggatggccg
gccatttccgaaggtccgatgctccgcctgggggacaccggcccacgggtaacggaactc
cgagcccggttggctgccggcggagatgtcgtttcaggcattgccgaagtggaaggggta
ttcgacgaagaagtggaacaggccgtaatccggttccagcagagtcacggcctcgacgcg
gacggagccgtgggggagcagacccttgcggccctgaacgtaccggcagaggaacgggaa
aagcagattctggttaacctggagcgcctgcgctggctaccggccgacctcggcaacagg
catatcatggtgaacgtggccggcttcagccttcacgtcattgaagggggagagactctg
acgggaatgcgggccatcgtcgggcggccttaccgccaaaccccatccttcagcggcaag
ctgacccatctcgttttcagcccctactggcatatcccccacagcatcgctgtcaaggat
cttctccccaaaatccagaaggaccgccgtttcctggccagggagaaaattcgtgttttc
cggggccgtggcaaggcggaacggccggtcaatccgacaaaaataaagtggcagcagctc
agtgaaaacaacttcccctaccatctgcgccaggatccaggccccctcaactccctaggg
cgcgtcaaattcatgctccccaacagcttcaacgtctacattcacgacaccccctcgcgg
gagctgttcgaaaaggcagtgcgtggcttcagctcgggatgcataaggatcgacagcccc
gtggagctggctgagtacctgctgcgcgacgacccggcatggaccaccgaaactatcctg
gaggccatggaacagccgcgggagagaaccgtccggctgccgcggccgattcccgtccac
ttcctctacatgacggcgtgggtggatacagaaggagtgctccagttccgcgacgatatt
tactcacgggacacactggttgcagacgccctggaagcggcacccccttcccggtga
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